RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 SCN10AQ9Y5Y9 1956 aa15.78■□□□□ 0.12
APOBEC3B-202ENST00000335760 POTEB3A0JP26 581 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 OATP04181 439 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 ATN1P54259 1190 aaPredicted RBP15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 FAM47CQ5HY64 1035 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 AXDND1Q5T1B0 1012 aaPredicted RBP15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 POTEBQ6S5H4 581 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 SLC39A5Q6ZMH5 540 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 UBE2Q1Q7Z7E8 422 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 C4orf19Q8IY42 314 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 C7orf31Q8N865 590 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 ZNF579Q8NAF0 562 aaKnown RBP15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 ATP8B4Q8TF62 1192 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 FAM167AQ96KS9 214 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 NRBP2Q9NSY0 501 aa15.77■□□□□ 0.12
APOBEC3B-202ENST00000335760 DDX11L8A8MPP1 907 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 ARVCFO00192 962 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 STBD1O95210 358 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 SMIM10L2AP0DMW4 78 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 SMIM10L2BP0DMW5 78 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 ECM1Q16610 540 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 XKR3Q5GH77 459 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 NFRKBQ6P4R8 1299 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 POTEGQ6S5H5 508 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 USP49Q70CQ1 688 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 BBXQ8WY36 941 aaPredicted RBP15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 SYMPKQ92797 1274 aaKnown RBP15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 EPSTI1Q96J88 318 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 HDAC6Q9UBN7 1215 aa15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 SEPT9Q9UHD8 586 aaPredicted RBP15.76■□□□□ 0.11
APOBEC3B-202ENST00000335760 A0A087WWV3 80 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 TMEM150BA6NC51 233 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 HBP1O60381 514 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 LYPLA2O95372 231 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 TXLNAP40222 546 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 PPFIA1Q13136 1202 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 TPRNQ4KMQ1 711 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 SHC4Q6S5L8 630 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 SLC43A3Q8NBI5 491 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 RASSF8Q8NHQ8 419 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 CALML4Q96GE6 196 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 CDK5RAP3Q96JB5 506 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 PNMA5Q96PV4 448 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 PLIN2Q99541 437 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 CCSER1Q9C0I3 900 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 DDX19AQ9NUU7 478 aaKnown RBP15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 SETD4Q9NVD3 440 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 KIAA1024Q9UPX6 916 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 KDM3AQ9Y4C1 1321 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 ZBTB39O15060 712 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 SLC26A4O43511 780 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 INSRRP14616 1297 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 MUTP22033 750 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 YWHABP31946 246 aaKnown RBP15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 CDK7P50613 346 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 IGBP1P78318 339 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 PTPN11Q06124 597 aaPredicted RBP15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 GRB10Q13322 594 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 KARSQ15046 597 aaKnown RBP15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 GRIK4Q16099 956 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 CSPP1Q1MSJ5 1256 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 ZNF484Q5JVG2 852 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 HYIQ5T013 277 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 PLA2G4FQ68DD2 849 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 ADALQ6DHV7 355 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 ANO5Q75V66 913 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 OTUD6AQ7L8S5 288 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 SESTD1Q86VW0 696 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 PIGOQ8TEQ8 1089 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 NACC1Q96RE7 527 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 NIFKQ9BYG3 293 aaKnown RBP15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 SEZ6LQ9BYH1 1024 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 GTF2IRD1Q9UHL9 959 aa15.75■□□□□ 0.11
APOBEC3B-202ENST00000335760 C17orf102A2RUQ5 167 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 HIC1Q14526 733 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 SNX17Q15036 470 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 LRRC26Q2I0M4 334 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 TRIM60Q495X7 471 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 MTERF2Q49AM1 385 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 TMEM119Q4V9L6 283 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 RESP18Q5W5W9 173 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 GDF6Q6KF10 455 aaPredicted RBP15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 LMBR1Q8WVP7 490 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 TRAPPC12Q8WVT3 735 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 SH2D3AQ9BRG2 576 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 NT5C3AQ9H0P0 336 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 FAM13BQ9NYF5 915 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 CCDC39Q9UFE4 941 aa15.74■□□□□ 0.11
APOBEC3B-202ENST00000335760 NRCAMQ92823 1304 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 GOLGA6L4A6NEF3 574 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 RRN3P2A6NIE6 340 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 ZBTB42B2RXF5 422 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 GNAT1P11488 350 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 XRCC6P12956 609 aaKnown RBP eCLIP15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 NPEPPSP55786 919 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 RTP1P59025 263 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 ZNF200P98182 395 aaPredicted RBP15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 XKR9Q5GH70 373 aa15.73■□□□□ 0.11
APOBEC3B-202ENST00000335760 C1orf53Q5VUE5 145 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms