RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 PDHBP11177 359 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 ADCY8P40145 1251 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 SARNPP82979 210 aaKnown RBP16.29■□□□□ 0.2
C9orf47-201ENST00000334490 PPP2R5EQ16537 467 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 TXNRD3Q86VQ6 643 aa16.29■□□□□ 0.2
C9orf47-201ENST00000334490 PVALEFA0A1B0GWK0 134 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 MED7O43513 233 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 CTNND1O60716 968 aaKnown RBP16.28■□□□□ 0.2
C9orf47-201ENST00000334490 CELF2O95319 508 aaKnown RBP16.28■□□□□ 0.2
C9orf47-201ENST00000334490 MAPK4P31152 587 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 BIRC2Q13490 618 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 NAA35Q5VZE5 725 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 GSDMBQ8TAX9 411 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 HEXIM2Q96MH2 286 aaKnown RBP16.28■□□□□ 0.2
C9orf47-201ENST00000334490 CCL15-CCL14A0A0B4J2E2 113 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 ZBED6P86452 979 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 CCL15Q16663 113 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 WHAMMP3Q1A5X7 153 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 PARK7Q99497 189 aaKnown RBP16.28■□□□□ 0.2
C9orf47-201ENST00000334490 EIF2AK1Q9BQI3 630 aaKnown RBP16.28■□□□□ 0.2
C9orf47-201ENST00000334490 RSPH14Q9UHP6 348 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 ATP1A3P13637 1013 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 KRT15P19012 456 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 TAB3Q8N5C8 712 aaPredicted RBP16.28■□□□□ 0.2
C9orf47-201ENST00000334490 ELF1P32519 619 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 ARMCX2Q7L311 632 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 OR6B3Q8NGW1 331 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 MICAL1Q8TDZ2 1067 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 CCT6BQ92526 530 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 CALCOCO1Q9P1Z2 691 aa16.28■□□□□ 0.2
C9orf47-201ENST00000334490 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 CRCPO75575 148 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 EPHA7Q15375 998 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 OR6B2Q6IFH4 312 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 JPH1Q9HDC5 661 aaPredicted RBP16.27■□□□□ 0.2
C9orf47-201ENST00000334490 IQGAP1P46940 1657 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 GOLGA6CA6NDK9 693 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 GOLGA6BA6NDN3 693 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 H7C0C1 242 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 GIPC1O14908 333 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 GOLGA6DP0CG33 693 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 ATP5OP48047 213 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 COASYQ13057 564 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 PPP2R5CQ13362 524 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 KRT31Q15323 416 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 DNAJC24Q6P3W2 148 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 TAOK1Q7L7X3 1001 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 GRK7Q8WTQ7 553 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 GOLGA6AQ9NYA3 693 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 SAMD15Q9P1V8 674 aa16.27■□□□□ 0.2
C9orf47-201ENST00000334490 NR3C1P04150 777 aa16.27■□□□□ 0.19
C9orf47-201ENST00000334490 VIMP08670 466 aaKnown RBP16.27■□□□□ 0.19
C9orf47-201ENST00000334490 SLC12A2P55011 1212 aa16.27■□□□□ 0.19
C9orf47-201ENST00000334490 TCP11X2Q5H9J9 407 aa16.27■□□□□ 0.19
C9orf47-201ENST00000334490 KCNV1Q6PIU1 500 aa16.27■□□□□ 0.19
C9orf47-201ENST00000334490 RUFY4Q6ZNE9 571 aa16.27■□□□□ 0.19
C9orf47-201ENST00000334490 GDAP1L1Q96MZ0 367 aa16.27■□□□□ 0.19
C9orf47-201ENST00000334490 NR3C2P08235 984 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 STAT5BP51692 787 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 KIF11P52732 1056 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 NFIAQ12857 509 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 CCDC6Q16204 474 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 SIX6OS1Q8N1H7 587 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 KIAA1586Q9HCI6 787 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 BCL9O00512 1426 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 GGPS1O95749 300 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 ATP2C1P98194 919 aaPredicted RBP16.26■□□□□ 0.19
C9orf47-201ENST00000334490 TNFAIP2Q03169 654 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 FAM213AQ9BRX8 229 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 IFT122Q9HBG6 1241 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 VWDEQ8N2E2 1590 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 CROCCP2Q86T23 111 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 PALM2Q8IXS6 379 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 RGL1Q9NZL6 768 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 TYW5A2RUC4 315 aaKnown RBP16.26■□□□□ 0.19
C9orf47-201ENST00000334490 TRIM49BA6NDI0 452 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 CYP2B6P20813 491 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 ANTXR2P58335 489 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 CXCL9Q07325 125 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 NBPF11Q86T75 865 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 POLR3FQ9H1D9 316 aaPredicted RBP16.26■□□□□ 0.19
C9orf47-201ENST00000334490 SLC38A10Q9HBR0 1119 aa16.26■□□□□ 0.19
C9orf47-201ENST00000334490 PXDNQ92626 1479 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 ZNF394Q53GI3 561 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 CYFIP1Q7L576 1253 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 C2orf40Q9H1Z8 148 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 DPH5Q9H2P9 285 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 ZFYVE28Q9HCC9 887 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 SLIT1O75093 1534 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 EIF4A3P38919 411 aaKnown RBP16.25■□□□□ 0.19
C9orf47-201ENST00000334490 GCLMP48507 274 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 MAP7D1Q3KQU3 841 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 RINT1Q6NUQ1 792 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 PHLDB2Q86SQ0 1253 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 MRPL47Q9HD33 250 aaKnown RBP16.25■□□□□ 0.19
C9orf47-201ENST00000334490 PHLPP2Q6ZVD8 1323 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 TKFCQ3LXA3 575 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 PPP1R2P3Q6NXS1 205 aa16.25■□□□□ 0.19
C9orf47-201ENST00000334490 ZKSCAN4Q969J2 545 aaPredicted RBP16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms