RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 LRCH1Q9Y2L9 728 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAGI2Q86UL8 1455 aa6.5□□□□□ -1.37
CDC42BPA-201ENST00000334218 LOXHD1Q8IVV2 1947 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ABLIM1O14639 778 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 SPAG7O75391 227 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARL1P40616 181 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ADCY1Q08828 1119 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TDGQ13569 410 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 E2F4Q16254 413 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 GPIHBP1Q8IV16 184 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 USP13Q92995 863 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 GGNBP2Q9H3C7 697 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TIMMDC1Q9NPL8 285 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 MRPL22Q9NWU5 206 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 PCDHGA11Q9Y5H2 935 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 UHRF1BP1LA0JNW5 1464 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 H3BM21 787 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TEFQ10587 303 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 CAPRIN1Q14444 709 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 HEXDCQ8WVB3 486 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 L3MBTL2Q969R5 705 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 PBXIP1Q96AQ6 731 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 VPS50Q96JG6 964 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 XKR8Q9H6D3 395 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 MLXQ9UH92 298 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 BTBD19C9JJ37 291 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCT3P49368 545 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ROR2Q01974 943 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 PTPN20Q4JDL3 420 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ATG16L1Q676U5 607 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 NEK10Q6ZWH5 1172 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 RPLP0P6Q8NHW5 317 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ACAP3Q96P50 834 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TSEN34Q9BSV6 310 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 DAPK1P53355 1430 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 AHCYL1O43865 530 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARHGDIAP52565 204 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 KRT32Q14532 448 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC103Q8IW40 242 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 SMAD5Q99717 465 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ARHGEF11O15085 1522 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ACADSP16219 412 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 GTF2H1P32780 548 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 SGO2Q562F6 1265 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 C11orf88Q6PI97 169 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 STK24Q9Y6E0 443 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 MYH13Q9UKX3 1938 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 MINK1Q8N4C8 1332 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ATP10AO60312 1499 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 FAM177BA6PVY3 158 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ALOX5P09917 674 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 PCNAP12004 261 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZNF3P17036 446 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 PSMA2P25787 234 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 STX2P32856 288 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 SOX6P35712 828 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 NLRP6P59044 892 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 MTERF2Q49AM1 385 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC58Q4VC31 144 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TTC30BQ8N4P2 665 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCP11L2Q8N4U5 519 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 CUL5Q93034 780 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 KRT12Q99456 494 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 MAFFQ9ULX9 164 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 CCDC169A6NNP5 214 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZNF806P0C7X5 589 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 NCF2P19878 526 aaPredicted RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 EEF1B2P24534 225 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZNF568Q3ZCX4 644 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCP11X2Q5H9J9 407 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCEAL5Q5H9L2 206 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 CTNNAL1Q9UBT7 734 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 VTI1BQ9UEU0 232 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 RUVBL1Q9Y265 456 aaKnown RBP6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 SAC3D1A6NKF1 404 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 PMS2P54278 862 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ALS2CLQ60I27 953 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 SPAG16Q8N0X2 631 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 METTL6Q8TCB7 284 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCEAL3Q969E4 200 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 DESI2Q9BSY9 194 aa6.49□□□□□ -1.37
CDC42BPA-201ENST00000334218 ADGRA3Q8IWK6 1321 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 DLATP10515 647 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TCF3P15923 654 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SLC4A3P48751 1232 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 AKR1D1P51857 326 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 PSMD4P55036 377 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 KANSL1Q7Z3B3 1105 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 NEUROD6Q96NK8 337 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 SAV1Q9H4B6 383 aaPredicted RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ANKFY1Q9P2R3 1169 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZC3H7BQ9UGR2 993 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 NVLO15381 856 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 TSPAN1O60635 241 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 CALM1P0DP23 149 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 CALM2P0DP24 149 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 CALM3P0DP25 149 aa6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 YAP1P46937 504 aaKnown RBP6.48□□□□□ -1.37
CDC42BPA-201ENST00000334218 ZSCAN23Q3MJ62 389 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms