RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 SH2D3AQ9BRG2 576 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 AJAP1Q9UKB5 411 aaPredicted RBP20.81■□□□□ 0.92
RFTN1-201ENST00000334133 BCS1LQ9Y276 419 aa20.81■□□□□ 0.92
RFTN1-201ENST00000334133 SLITRK3O94933 977 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 GNA14O95837 355 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 DMGDHQ9UI17 866 aaKnown RBP20.8■□□□□ 0.92
RFTN1-201ENST00000334133 ADAM21Q9UKJ8 722 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 SHTN1A0MZ66 631 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 NR3C1P04150 777 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 CIITAP33076 1130 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 CYP2C19P33261 490 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 KIAA0753Q2KHM9 967 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 CCDC181Q5TID7 509 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 WDR93Q6P2C0 686 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 RSBN1LQ6PCB5 846 aaPredicted RBP20.8■□□□□ 0.92
RFTN1-201ENST00000334133 OTOP1Q7RTM1 612 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 TLR10Q9BXR5 811 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 GANQ9H2C0 597 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 ASTN1O14525 1302 aa20.8■□□□□ 0.92
RFTN1-201ENST00000334133 GCOM1H8Y6P7 765 aaPredicted RBP20.79■□□□□ 0.92
RFTN1-201ENST00000334133 NPM3O75607 178 aaKnown RBP20.79■□□□□ 0.92
RFTN1-201ENST00000334133 PALMO75781 387 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 POLR2MP0CAP2 368 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 MMP14P50281 582 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 KLHDC7AQ5VTJ3 777 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 OGFOD1Q8N543 542 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 SPAG5Q96R06 1193 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 TMX2Q9Y320 296 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 XRCC5P13010 732 aaKnown RBP20.79■□□□□ 0.92
RFTN1-201ENST00000334133 ASIC2Q16515 512 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 NOX5Q96PH1 765 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 GAS7O60861 476 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 FAM13AO94988 1023 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 LMAN1P49257 510 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 PTK2Q05397 1052 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 EDRF1Q3B7T1 1238 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.79■□□□□ 0.92
RFTN1-201ENST00000334133 EPM2AIP1Q7L775 607 aaPredicted RBP20.79■□□□□ 0.92
RFTN1-201ENST00000334133 BANK1Q8NDB2 785 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 SPATA4Q8NEY3 305 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 AGBL1Q96MI9 1066 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 GBP3Q9H0R5 595 aa20.79■□□□□ 0.92
RFTN1-201ENST00000334133 SSU72P8A0A1W2PR75 194 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 TUBB4BP68371 445 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 MAPK8IP2Q13387 824 aaPredicted RBP20.78■□□□□ 0.92
RFTN1-201ENST00000334133 SLC15A2Q16348 729 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 TBC1D10BQ4KMP7 808 aaPredicted RBP20.78■□□□□ 0.92
RFTN1-201ENST00000334133 HSD17B14Q9BPX1 270 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 GOPCQ9HD26 462 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 HOMER2Q9NSB8 354 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 HERC5Q9UII4 1024 aaKnown RBP20.78■□□□□ 0.92
RFTN1-201ENST00000334133 EYA4O95677 639 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 AFPP02771 609 aaKnown RBP20.78■□□□□ 0.92
RFTN1-201ENST00000334133 MARSP56192 900 aaKnown RBP20.78■□□□□ 0.92
RFTN1-201ENST00000334133 EXOC3L4Q17RC7 722 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 RDH13Q8NBN7 331 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 TRAF3IP3Q9Y228 551 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 CNTNAP1P78357 1384 aa20.78■□□□□ 0.92
RFTN1-201ENST00000334133 UCHL3P15374 230 aa20.77■□□□□ 0.92
RFTN1-201ENST00000334133 PON1P27169 355 aa20.77■□□□□ 0.92
RFTN1-201ENST00000334133 CPXCR1Q8N123 301 aa20.77■□□□□ 0.92
RFTN1-201ENST00000334133 FAM184BQ9ULE4 1060 aa20.77■□□□□ 0.92
RFTN1-201ENST00000334133 HYOU1Q9Y4L1 999 aa20.77■□□□□ 0.92
RFTN1-201ENST00000334133 RBM46Q8TBY0 533 aaKnown RBP20.77■□□□□ 0.92
RFTN1-201ENST00000334133 ZNF577Q9BSK1 485 aa20.77■□□□□ 0.92
RFTN1-201ENST00000334133 TGFB1I1O43294 461 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 EIF3JO75822 258 aaKnown RBP20.76■□□□□ 0.91
RFTN1-201ENST00000334133 PSMD10O75832 226 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 SLC18A3Q16572 532 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 NBPF9Q3BBW0 867 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 ZNF571Q7Z3V5 609 aaPredicted RBP20.76■□□□□ 0.91
RFTN1-201ENST00000334133 FAM151AQ8WW52 585 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 EDEM3Q9BZQ6 932 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 CALUO43852 315 aaPredicted RBP20.76■□□□□ 0.91
RFTN1-201ENST00000334133 CYP2J2P51589 502 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 GPS2Q13227 327 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 LDHDQ86WU2 507 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 UNC45AQ9H3U1 944 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 RBM12Q9NTZ6 932 aaKnown RBP20.76■□□□□ 0.91
RFTN1-201ENST00000334133 PJA2O43164 708 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 CYP3A4P08684 503 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 FOXR2Q6PJQ5 311 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 PPP4R3CPQ6ZMV5 832 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 POLR3CQ9BUI4 534 aaPredicted RBP20.76■□□□□ 0.91
RFTN1-201ENST00000334133 TYW1Q9NV66 732 aaKnown RBP20.76■□□□□ 0.91
RFTN1-201ENST00000334133 GCNT4Q9P109 453 aa20.76■□□□□ 0.91
RFTN1-201ENST00000334133 ZNF646O15015 1829 aaPredicted RBP20.76■□□□□ 0.91
RFTN1-201ENST00000334133 PIK3CDO00329 1044 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 PDXKO00764 312 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 INPP5BP32019 993 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 CEP55Q53EZ4 464 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 HSP90B2PQ58FF3 399 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 CCNI2Q6ZMN8 369 aaPredicted RBP20.75■□□□□ 0.91
RFTN1-201ENST00000334133 IRF2BP2Q7Z5L9 587 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 ZC3H3Q8IXZ2 948 aaKnown RBP20.75■□□□□ 0.91
RFTN1-201ENST00000334133 SLC35C1Q96A29 364 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 VCPKMTQ9H867 229 aa20.75■□□□□ 0.91
RFTN1-201ENST00000334133 A0A0U1RQG5 324 aaPredicted RBP20.74■□□□□ 0.91
RFTN1-201ENST00000334133 EPB41P11171 864 aaKnown RBP20.74■□□□□ 0.91
RFTN1-201ENST00000334133 DPY19L2P1Q6NXN4 242 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms