RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 NFU1Q9UMS0 254 aa11.06□□□□□ -0.64
SPTBN1-201ENST00000333896 GUCY1B2O75343 617 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CCDC142Q17RM4 750 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 SEC16BQ96JE7 1060 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 OLFML3Q9NRN5 406 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 TLK1Q9UKI8 766 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CCPG1Q9ULG6 757 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 L3MBTL1Q9Y468 752 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 SYNJ2BP-COX16A0A087WUM0 186 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 KRT87PA6NCN2 255 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 H7C0C1 242 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 ATP5OP48047 213 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 KHDRBS2Q5VWX1 349 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CRELD2Q6UXH1 353 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PIK3AP1Q6ZUJ8 805 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 LUZP2Q86TE4 346 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 TTC30BQ8N4P2 665 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 RPS6KC1Q96S38 1066 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 COX16Q9P0S2 106 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 SLC27A2O14975 620 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 YWHAEP62258 255 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CALCRLQ16602 461 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 TRIM67Q6ZTA4 783 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 AFAP1Q8N556 730 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 SMCR8Q8TEV9 937 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CYFIP2Q96F07 1278 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PARVGQ9HBI0 331 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PFKFB1P16118 471 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 IFNA8P32881 189 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 MECOMQ03112 1051 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PATL1Q86TB9 770 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CADPS2Q86UW7 1296 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 ZNF274Q96GC6 653 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 GPHNQ9NQX3 736 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 A6NJR5 290 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CARD8Q9Y2G2 431 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 RPS6KA5O75582 802 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PRDM1O75626 825 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PAX7P23759 505 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CNGA2Q16280 664 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PPP6R3Q5H9R7 873 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 NAA35Q5VZE5 725 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PCNX4Q63HM2 1172 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 PCGF5Q86SE9 256 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 RDH13Q8NBN7 331 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 C19orf60Q96EN9 201 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 GORASP1Q9BQQ3 440 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 RABGEF1Q9UJ41 708 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CORO1CQ9ULV4 474 aaPredicted RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 SERPINB8P50452 374 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 USP14P54578 494 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 EHHADHQ08426 723 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 CYTH1Q15438 398 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 DYMQ7RTS9 669 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 YTHDF3Q7Z739 585 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 DTX3LQ8TDB6 740 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 LRRC59Q96AG4 307 aaKnown RBP11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 LZTS2Q9BRK4 669 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 GPCPD1Q9NPB8 672 aa11.05□□□□□ -0.64
SPTBN1-201ENST00000333896 ASNA1O43681 348 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 PPP6R2O75170 966 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 MTTPP55157 894 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 CCDC103Q8IW40 242 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 MRPL50Q8N5N7 158 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 KCNV2Q8TDN2 545 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 SNX14Q9Y5W7 946 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 PDE4DIPQ5VU43 2346 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 WASHC5Q12768 1159 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 BTNL9Q6UXG8 535 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 TXKP42681 527 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 COPS2P61201 443 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 CDH24Q86UP0 819 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 MTBPQ96DY7 904 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 CMTM5Q96DZ9 223 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 DNM3Q9UQ16 869 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 RGS2P41220 211 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 IRAK1P51617 712 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 FCHO2Q0JRZ9 810 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 HERC4Q5GLZ8 1057 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 SNX19Q92543 992 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 MBIPQ9NS73 344 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 HACD3Q9P035 362 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 GGA2Q9UJY4 613 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 CLEC11AQ9Y240 323 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 HAUS5O94927 633 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 POTEEQ6S8J3 1075 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 ZNF804AQ7Z570 1209 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 MMS19Q96T76 1030 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 GINS4Q9BRT9 223 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 KLHL25Q9H0H3 589 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 MTMR6Q9Y217 621 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 RPN1P04843 607 aaKnown RBP11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 TCP11X2Q5H9J9 407 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 TUBA3EQ6PEY2 450 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 KIRREL3Q8IZU9 778 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 CALML6Q8TD86 181 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 DHTKD1Q96HY7 919 aaPredicted RBP11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 KCNG1Q9UIX4 513 aa11.04□□□□□ -0.64
SPTBN1-201ENST00000333896 TMCO1Q9UM00 188 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms