RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 LMBR1Q8WVP7 490 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 USP28Q96RU2 1077 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 NRBP2Q9NSY0 501 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 TUBE1Q9UJT0 475 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 CLIC4Q9Y696 253 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 TANC1Q9C0D5 1861 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 TRIM43BA6NCK2 446 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 TIMP1P01033 207 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 RPLP2P05387 115 aaKnown RBP23.01■■□□□ 1.27
MRPL40-201ENST00000333130 CYP2C9P11712 490 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 INSRRP14616 1297 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 HOXC8P31273 242 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 QARSP47897 775 aaKnown RBP23.01■■□□□ 1.27
MRPL40-201ENST00000333130 NASPP49321 788 aaPredicted RBP23.01■■□□□ 1.27
MRPL40-201ENST00000333130 IGBP1P78318 339 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 PRKCEQ02156 737 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 ATL3Q6DD88 541 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 SH3RF1Q7Z6J0 888 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 RETREG2Q8NC44 543 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 TRIM43Q96BQ3 446 aaPredicted RBP23.01■■□□□ 1.27
MRPL40-201ENST00000333130 PPP1R12CQ9BZL4 782 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 STK24Q9Y6E0 443 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 PITPNM1O00562 1244 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 OATP04181 439 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 ZNF484Q5JVG2 852 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 ARL6IP4Q66PJ3 421 aaKnown RBP23.01■■□□□ 1.27
MRPL40-201ENST00000333130 TMEM199Q8N511 208 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 BANK1Q8NDB2 785 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 ZNF396Q96N95 335 aaPredicted RBP23.01■■□□□ 1.27
MRPL40-201ENST00000333130 ATP6V1DQ9Y5K8 247 aa23.01■■□□□ 1.27
MRPL40-201ENST00000333130 EML1O00423 815 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 TECP42680 631 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 FXR2P51116 673 aaKnown RBP eCLIP23■■□□□ 1.27
MRPL40-201ENST00000333130 XKR3Q5GH77 459 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 HAUS3Q68CZ6 603 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 TAF2Q6P1X5 1199 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 DTHD1Q6ZMT9 781 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 TRMT1LQ7Z2T5 733 aaKnown RBP23■■□□□ 1.27
MRPL40-201ENST00000333130 RSPH3Q86UC2 560 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 SERINC5Q86VE9 423 aa23■■□□□ 1.27
MRPL40-201ENST00000333130 NOC4LQ9BVI4 516 aaKnown RBP23■■□□□ 1.27
MRPL40-201ENST00000333130 POTEMA6NI47 508 aa22.99■■□□□ 1.27
MRPL40-201ENST00000333130 TREHO43280 583 aa22.99■■□□□ 1.27
MRPL40-201ENST00000333130 EIF2AK1Q9BQI3 630 aaKnown RBP22.99■■□□□ 1.27
MRPL40-201ENST00000333130 LXNQ9BS40 222 aa22.99■■□□□ 1.27
MRPL40-201ENST00000333130 ZSWIM4Q9H7M6 989 aa22.99■■□□□ 1.27
MRPL40-201ENST00000333130 CHMP5Q9NZZ3 219 aa22.99■■□□□ 1.27
MRPL40-201ENST00000333130 SEPT9Q9UHD8 586 aaPredicted RBP22.99■■□□□ 1.27
MRPL40-201ENST00000333130 EVPLQ92817 2033 aa22.99■■□□□ 1.27
MRPL40-201ENST00000333130 CAND2O75155 1236 aa22.98■■□□□ 1.27
MRPL40-201ENST00000333130 ZNF200P98182 395 aaPredicted RBP22.98■■□□□ 1.27
MRPL40-201ENST00000333130 MDM2Q00987 491 aaPredicted RBP22.98■■□□□ 1.27
MRPL40-201ENST00000333130 DNM1Q05193 864 aaKnown RBP22.98■■□□□ 1.27
MRPL40-201ENST00000333130 IL17AQ16552 155 aa22.98■■□□□ 1.27
MRPL40-201ENST00000333130 UGCGQ16739 394 aa22.98■■□□□ 1.27
MRPL40-201ENST00000333130 MFSD5Q6N075 450 aa22.98■■□□□ 1.27
MRPL40-201ENST00000333130 CCDC43Q96MW1 224 aaKnown RBP22.98■■□□□ 1.27
MRPL40-201ENST00000333130 LOXHD1Q8IVV2 1947 aa22.98■■□□□ 1.27
MRPL40-201ENST00000333130 ZNF862O60290 1169 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 PARNO95453 639 aaKnown RBP22.97■■□□□ 1.27
MRPL40-201ENST00000333130 YEATS4O95619 227 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 MAGEA10P43363 369 aaPredicted RBP22.97■■□□□ 1.27
MRPL40-201ENST00000333130 CYP4A11Q02928 519 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 FPGSQ05932 587 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 PPIGQ13427 754 aaKnown RBP eCLIP22.97■■□□□ 1.27
MRPL40-201ENST00000333130 PDIA5Q14554 519 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 SLC39A14Q15043 492 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 OTUD6AQ7L8S5 288 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 TPH2Q8IWU9 490 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 IGSF22Q8N9C0 903 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 LINC00301Q8NCQ3 95 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 BADQ92934 168 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 DYDC2Q96IM9 177 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 LRWD1Q9UFC0 647 aa22.97■■□□□ 1.27
MRPL40-201ENST00000333130 MBLAC1A4D2B0 266 aaPredicted RBP22.96■■□□□ 1.27
MRPL40-201ENST00000333130 ATP4AP20648 1035 aa22.96■■□□□ 1.27
MRPL40-201ENST00000333130 CYP2C18P33260 490 aa22.96■■□□□ 1.27
MRPL40-201ENST00000333130 ADAM17P78536 824 aa22.96■■□□□ 1.27
MRPL40-201ENST00000333130 CEBPZQ03701 1054 aaKnown RBP22.96■■□□□ 1.27
MRPL40-201ENST00000333130 RBL2Q08999 1139 aa22.96■■□□□ 1.27
MRPL40-201ENST00000333130 FOXD4L6Q3SYB3 417 aaPredicted RBP22.96■■□□□ 1.27
MRPL40-201ENST00000333130 FOXD4L3Q6VB84 417 aaPredicted RBP22.96■■□□□ 1.27
MRPL40-201ENST00000333130 C4orf19Q8IY42 314 aa22.96■■□□□ 1.27
MRPL40-201ENST00000333130 TUFT1Q9NNX1 390 aa22.96■■□□□ 1.27
MRPL40-201ENST00000333130 TFIP11Q9UBB9 837 aaKnown RBP22.96■■□□□ 1.27
MRPL40-201ENST00000333130 CFAP45Q9UL16 551 aa22.96■■□□□ 1.27
MRPL40-201ENST00000333130 ARID2Q68CP9 1835 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 DDX11L8A8MPP1 907 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 MAGEB2O15479 319 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 SELPP16109 830 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 RFC2P35250 354 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 THPOP40225 353 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 HIC1Q14526 733 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 EXOC8Q8IYI6 725 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 CTAGE1Q96RT6 745 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 RGL1Q9NZL6 768 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 PPME1Q9Y570 386 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 PCDHA2Q9Y5H9 948 aa22.95■■□□□ 1.26
MRPL40-201ENST00000333130 M0QZ92 97 aa22.94■■□□□ 1.26
MRPL40-201ENST00000333130 CKBP12277 381 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms