RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 GTF2IRD1Q9UHL9 959 aa18■□□□□ 0.47
LRRC28-202ENST00000331450 SIP14410 1827 aa18■□□□□ 0.47
LRRC28-202ENST00000331450 POTEB3A0JP26 581 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 OATP04181 439 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 ADAM17P78536 824 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 CTTNQ14247 550 aaKnown RBP17.99■□□□□ 0.47
LRRC28-202ENST00000331450 HAUS3Q68CZ6 603 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 POTEBQ6S5H4 581 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 ANKRD33Q7Z3H0 272 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 CATSPER3Q86XQ3 398 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 FAM126BQ8IXS8 530 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 LEO1Q8WVC0 666 aaPredicted RBP17.99■□□□□ 0.47
LRRC28-202ENST00000331450 BBXQ8WY36 941 aaPredicted RBP17.99■□□□□ 0.47
LRRC28-202ENST00000331450 FAM167AQ96KS9 214 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 CSRNP2Q9H175 543 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 ZSWIM4Q9H7M6 989 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 STK24Q9Y6E0 443 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 COL1A2P08123 1366 aa17.99■□□□□ 0.47
LRRC28-202ENST00000331450 MROH7Q68CQ1 1323 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 ZBTB42B2RXF5 422 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 HBP1O60381 514 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 DKC1O60832 514 aaKnown RBP eCLIP17.98■□□□□ 0.47
LRRC28-202ENST00000331450 MUTP22033 750 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 CDC25AP30304 524 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 RTP1P59025 263 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 TRIM60Q495X7 471 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 XKR3Q5GH77 459 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 HYIQ5T013 277 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 AXDND1Q5T1B0 1012 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-202ENST00000331450 GDF6Q6KF10 455 aaPredicted RBP17.98■□□□□ 0.47
LRRC28-202ENST00000331450 C7orf31Q8N865 590 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 SNX29Q8TEQ0 813 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 LMBR1Q8WVP7 490 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 CLIC6Q96NY7 704 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 CTAGE1Q96RT6 745 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 TRPC6Q9Y210 931 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 NRCAMQ92823 1304 aa17.98■□□□□ 0.47
LRRC28-202ENST00000331450 SLC26A4O43511 780 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 B4GALT4O60513 344 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 CUTAO60888 179 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 CD4P01730 458 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 INSRRP14616 1297 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 NCLP19338 710 aaKnown RBP17.97■□□□□ 0.47
LRRC28-202ENST00000331450 CCT6AP40227 531 aaKnown RBP17.97■□□□□ 0.47
LRRC28-202ENST00000331450 RGS19P49795 217 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 CHMP4BP1P59074 171 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 PPFIA1Q13136 1202 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 TARBP2Q15633 366 aaKnown RBP17.97■□□□□ 0.47
LRRC28-202ENST00000331450 GRIK4Q16099 956 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 ECM1Q16610 540 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 FAM47CQ5HY64 1035 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 ANO5Q75V66 913 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 TPH2Q8IWU9 490 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 CKAP2LQ8IYA6 745 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 ZNF579Q8NAF0 562 aaKnown RBP17.97■□□□□ 0.47
LRRC28-202ENST00000331450 SPATA32Q96LK8 384 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 TOX2Q96NM4 488 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 NIFKQ9BYG3 293 aaKnown RBP17.97■□□□□ 0.47
LRRC28-202ENST00000331450 SCAND2PQ9GZW5 306 aaPredicted RBP17.97■□□□□ 0.47
LRRC28-202ENST00000331450 EVPLQ92817 2033 aa17.97■□□□□ 0.47
LRRC28-202ENST00000331450 MBLAC1A4D2B0 266 aaPredicted RBP17.96■□□□□ 0.47
LRRC28-202ENST00000331450 TMEM150BA6NC51 233 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 MARCH8Q5T0T0 291 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 KRT79Q5XKE5 535 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 POTEGQ6S5H5 508 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 USP49Q70CQ1 688 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 TNPO1Q92973 898 aaKnown RBP17.96■□□□□ 0.47
LRRC28-202ENST00000331450 CEP89Q96ST8 783 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 HTATIP2Q9BUP3 242 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 CCSER1Q9C0I3 900 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 SETD4Q9NVD3 440 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 SEPT9Q9UHD8 586 aaPredicted RBP17.96■□□□□ 0.47
LRRC28-202ENST00000331450 PCDHA7Q9UN72 937 aa17.96■□□□□ 0.47
LRRC28-202ENST00000331450 MKI67P46013 3256 aaKnown RBP17.96■□□□□ 0.47
LRRC28-202ENST00000331450 KDM3AQ9Y4C1 1321 aa17.96■□□□□ 0.46
LRRC28-202ENST00000331450 C17orf102A2RUQ5 167 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 RRN3P2A6NIE6 340 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 ZBTB39O15060 712 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 YWHABP31946 246 aaKnown RBP17.95■□□□□ 0.46
LRRC28-202ENST00000331450 ME1P48163 572 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 TLE2Q04725 743 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 GRB10Q13322 594 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 TMEM119Q4V9L6 283 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 ZNF484Q5JVG2 852 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 CABP7Q86V35 215 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 TRAPPC12Q8WVT3 735 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 SYMPKQ92797 1274 aaKnown RBP17.95■□□□□ 0.46
LRRC28-202ENST00000331450 EPSTI1Q96J88 318 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 PNMA5Q96PV4 448 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 TRPV6Q9H1D0 765 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 NRBP2Q9NSY0 501 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 TRMT13Q9NUP7 481 aaKnown RBP17.95■□□□□ 0.46
LRRC28-202ENST00000331450 ATP11BQ9Y2G3 1177 aa17.95■□□□□ 0.46
LRRC28-202ENST00000331450 PQBP1O60828 265 aaKnown RBP17.94■□□□□ 0.46
LRRC28-202ENST00000331450 C22orf31O95567 290 aa17.94■□□□□ 0.46
LRRC28-202ENST00000331450 XRCC6P12956 609 aaKnown RBP eCLIP17.94■□□□□ 0.46
LRRC28-202ENST00000331450 UBA7P41226 1012 aa17.94■□□□□ 0.46
LRRC28-202ENST00000331450 ZNF200P98182 395 aaPredicted RBP17.94■□□□□ 0.46
LRRC28-202ENST00000331450 FAAP100Q0VG06 881 aa17.94■□□□□ 0.46
LRRC28-202ENST00000331450 PTGISQ16647 500 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms