RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 RTCBQ9Y3I0 505 aaKnown RBP22.36■■□□□ 1.17
CMTM4-201ENST00000330687 MYO5AQ9Y4I1 1855 aaKnown RBP22.35■■□□□ 1.17
CMTM4-201ENST00000330687 GNAT2P19087 354 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 TBX22Q9Y458 520 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 MYMKA6NI61 221 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 USP11P51784 963 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 IFI16Q16666 785 aaKnown RBP22.35■■□□□ 1.17
CMTM4-201ENST00000330687 GJA10Q969M2 543 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 RASGRF2O14827 1237 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 SNX3O60493 162 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 GSTA1P08263 222 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 CYP2D6P10635 497 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 GBP1P32455 592 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 ASTE1Q2TB18 679 aaPredicted RBP22.35■■□□□ 1.17
CMTM4-201ENST00000330687 C4orf32Q8N8J7 132 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 CNBD1Q8NA66 436 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 HOMER3Q9NSC5 361 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 TMOD4Q9NZQ9 345 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 PCDHGC5Q9Y5F6 944 aa22.35■■□□□ 1.17
CMTM4-201ENST00000330687 UBE4AQ14139 1066 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 AADACL2Q6P093 401 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 B4GALNT2Q8NHY0 566 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 FAM114A2Q9NRY5 505 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 RGPD2P0DJD1 1756 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 ITIH4Q14624 930 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 PFKFB3Q16875 520 aaPredicted RBP22.34■■□□□ 1.17
CMTM4-201ENST00000330687 INTS8Q75QN2 995 aaKnown RBP22.34■■□□□ 1.17
CMTM4-201ENST00000330687 PBKQ96KB5 322 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 NUDCD1Q96RS6 583 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 CEP72Q9P209 647 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 MYH7BA7E2Y1 1941 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 POTEMA6NI47 508 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 ASAP2O43150 1006 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 PAEPP09466 180 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 OR52Z1P0C646 297 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 CTSWP56202 376 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 SLMAPQ14BN4 828 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 PPP1R15BQ5SWA1 713 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 SCFD2Q8WU76 684 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 ATXN2LQ8WWM7 1075 aaKnown RBP22.34■■□□□ 1.17
CMTM4-201ENST00000330687 RNF25Q96BH1 459 aaPredicted RBP22.34■■□□□ 1.17
CMTM4-201ENST00000330687 MRRFQ96E11 262 aaKnown RBP22.34■■□□□ 1.17
CMTM4-201ENST00000330687 RAB17Q9H0T7 212 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 PCDHA4Q9UN74 947 aa22.34■■□□□ 1.17
CMTM4-201ENST00000330687 AFF2P51816 1311 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 LCA5LO95447 670 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 CALM1P0DP23 149 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 CALM2P0DP24 149 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 CALM3P0DP25 149 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 PLCG2P16885 1265 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 TARSP26639 723 aaKnown RBP22.33■■□□□ 1.17
CMTM4-201ENST00000330687 NAPAP54920 295 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 RIPK1Q13546 671 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 FITM2Q8N6M3 262 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 SPIRE2Q8WWL2 714 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 CHORDC1Q9UHD1 332 aaPredicted RBP22.33■■□□□ 1.17
CMTM4-201ENST00000330687 SH3BP1Q9Y3L3 701 aa22.33■■□□□ 1.17
CMTM4-201ENST00000330687 KRT18P05783 430 aaKnown RBP22.33■■□□□ 1.16
CMTM4-201ENST00000330687 ZBTB38Q8NAP3 1195 aaPredicted RBP22.33■■□□□ 1.16
CMTM4-201ENST00000330687 C1orf131Q8NDD1 294 aaKnown RBP22.33■■□□□ 1.16
CMTM4-201ENST00000330687 ADAM33Q9BZ11 813 aa22.33■■□□□ 1.16
CMTM4-201ENST00000330687 KLHL14Q9P2G3 628 aa22.33■■□□□ 1.16
CMTM4-201ENST00000330687 DIP2AQ14689 1571 aa22.33■■□□□ 1.16
CMTM4-201ENST00000330687 PIGWQ7Z7B1 504 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 RMDN2Q96LZ7 410 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 TRIM7Q9C029 511 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 OSGEPQ9NPF4 335 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 METTL5Q9NRN9 209 aaKnown RBP22.32■■□□□ 1.16
CMTM4-201ENST00000330687 COL4A3BPQ9Y5P4 624 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 SLC9A1P19634 815 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 EIF3BP55884 814 aaKnown RBP22.32■■□□□ 1.16
CMTM4-201ENST00000330687 CENPPQ6IPU0 288 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 BIN2Q9UBW5 565 aaPredicted RBP22.32■■□□□ 1.16
CMTM4-201ENST00000330687 INTUQ9ULD6 942 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 AFDNP55196 1824 aaKnown RBP22.32■■□□□ 1.16
CMTM4-201ENST00000330687 STX2P32856 288 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 PPP2R5BQ15173 497 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 SYT15Q9BQS2 421 aa22.32■■□□□ 1.16
CMTM4-201ENST00000330687 TMEM120BA0PK00 339 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 GH1P01241 217 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 ZNF571Q7Z3V5 609 aaPredicted RBP22.31■■□□□ 1.16
CMTM4-201ENST00000330687 HAO1Q9UJM8 370 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 VPS41P49754 854 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 SPATA21Q7Z572 469 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 CTNNAL1Q9UBT7 734 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 FERP16591 822 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 ANO7Q6IWH7 933 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 ARHGEF2Q92974 986 aaKnown RBP22.31■■□□□ 1.16
CMTM4-201ENST00000330687 AMFRQ9UKV5 643 aa22.31■■□□□ 1.16
CMTM4-201ENST00000330687 ARHGAP23Q9P227 1491 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 hCG_2014768A0A024R1R8 64 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 WTIPA6NIX2 430 aaPredicted RBP22.3■■□□□ 1.16
CMTM4-201ENST00000330687 NOL4O94818 638 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 GYG1P46976 350 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 GJB7Q6PEY0 223 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 BARGINQ6ZT62 677 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 DDX12PQ92771 950 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 TLCD1Q96CP7 247 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 CCSER1Q9C0I3 900 aa22.3■■□□□ 1.16
CMTM4-201ENST00000330687 PABPC3Q9H361 631 aaKnown RBP22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms