RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 TMEM67Q5HYA8 995 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 FAM109BQ6ICB4 259 aaPredicted RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 KCNV1Q6PIU1 500 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 SLC30A10Q6XR72 485 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 STOX1Q6ZVD7 989 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 SGMS1Q86VZ5 419 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 NLRP8Q86W28 1048 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 UBE2OQ9C0C9 1292 aaKnown RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 UBA5Q9GZZ9 404 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 LY9Q9HBG7 655 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 ZMYND8Q9ULU4 1186 aaPredicted RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 MTMR7Q9Y216 660 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 FRMPD4Q14CM0 1322 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 SLC27A2O14975 620 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 CD4P01730 458 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 HMGB1P09429 215 aaKnown RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 GOLGA8HP0CJ92 632 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 EPXP11678 715 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 CDK11BP21127 795 aaKnown RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 GDF10P55107 478 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 SNAP25P60880 206 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 TLE2Q04725 743 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 PTPN11Q06124 597 aaPredicted RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 TTLL4Q14679 1199 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 PPP2R5BQ15173 497 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 STXBP2Q15833 593 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 MAP7D1Q3KQU3 841 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 OXLD1Q5BKU9 147 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 ANO1Q5XXA6 986 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 CREB3L3Q68CJ9 461 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 FIGNL1Q6PIW4 674 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 STAG2Q8N3U4 1231 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 FBXL16Q8N461 479 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 SYTL5Q8TDW5 730 aaPredicted RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 KCNB2Q92953 911 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 ZCCHC2Q9C0B9 1178 aaKnown RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 TBX21Q9UL17 535 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 HCN2Q9UL51 889 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 ATP11BQ9Y2G3 1177 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 PCDHGC4Q9Y5F7 938 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 KIAA1217Q5T5P2 1943 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 TMEM265A0A087WTH1 108 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.32□□□□□ -1.24
SMG1-201ENST00000330588 MYADML2A6NDP7 307 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 hCG_1984214I3L0E3 225 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 SH2B2O14492 632 aaPredicted RBP7.32□□□□□ -1.24
SMG1-201ENST00000330588 OPLAHO14841 1288 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 PRC1O43663 620 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 TGFB3P10600 412 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 SYN1P17600 705 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 CALML3P27482 149 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 PLA2G4AP47712 749 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 FAAP100Q0VG06 881 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 USH1GQ495M9 461 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 XRRA1Q6P2D8 792 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 CCDC62Q6P9F0 684 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 FBXO16Q8IX29 292 aaPredicted RBP7.32□□□□□ -1.24
SMG1-201ENST00000330588 FAM126BQ8IXS8 530 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 ZNF654Q8IZM8 581 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 ZNF713Q8N859 430 aaPredicted RBP7.32□□□□□ -1.24
SMG1-201ENST00000330588 CTCFLQ8NI51 663 aaPredicted RBP7.32□□□□□ -1.24
SMG1-201ENST00000330588 LENG1Q96BZ8 264 aaPredicted RBP7.32□□□□□ -1.24
SMG1-201ENST00000330588 CCDC136Q96JN2 1154 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 BTBD6Q96KE9 485 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 WDR11Q9BZH6 1224 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 ANO2Q9NQ90 1003 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 PCDHA1Q9Y5I3 950 aa7.32□□□□□ -1.24
SMG1-201ENST00000330588 NID2Q14112 1375 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 SCN10AQ9Y5Y9 1956 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 TRIM43BA6NCK2 446 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 CCDC69A6NI79 296 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 CYTH3O43739 400 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 DHX16O60231 1041 aaKnown RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 EIF3JO75822 258 aaKnown RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 TIMP1P01033 207 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 SUPT20HL2P0C7V6 817 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 HOXD8P13378 290 aaPredicted RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 SMTNP53814 917 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 CLDN10P78369 228 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 SMAD3P84022 425 aaKnown RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 PURAQ00577 322 aaKnown RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 CRTC2Q53ET0 693 aaPredicted RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 NFRKBQ6P4R8 1299 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 SESTD1Q86VW0 696 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 FERMT2Q96AC1 680 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 TRIM43Q96BQ3 446 aaPredicted RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 RRP36Q96EU6 259 aaKnown RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 RMDN3Q96TC7 470 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 NIFKQ9BYG3 293 aaKnown RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 SUV39H2Q9H5I1 410 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 PXMP2Q9NR77 195 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 RBM28Q9NW13 759 aaKnown RBP7.31□□□□□ -1.24
SMG1-201ENST00000330588 ZMIZ1Q9ULJ6 1067 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 TAF6LQ9Y6J9 622 aa7.31□□□□□ -1.24
SMG1-201ENST00000330588 GCOM1H8Y6P7 765 aaPredicted RBP7.3□□□□□ -1.24
SMG1-201ENST00000330588 DYNC1LI2O43237 492 aaPredicted RBP7.3□□□□□ -1.24
SMG1-201ENST00000330588 PPP1R11O60927 126 aaPredicted RBP7.3□□□□□ -1.24
SMG1-201ENST00000330588 REC8O95072 547 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 ATG7O95352 703 aa7.3□□□□□ -1.24
SMG1-201ENST00000330588 GH1P01241 217 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms