RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 RNF207Q6ZRF8 634 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 FAM160B2Q86V87 743 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 DDX17Q92841 729 aaKnown RBP22.6■■□□□ 1.21
RNF40-201ENST00000324685 PLAAQ9Y263 795 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 PNMA6FA0A0J9YX94 578 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 WDR91A4D1P6 747 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 SYT2Q8N9I0 419 aaPredicted RBP22.6■■□□□ 1.21
RNF40-201ENST00000324685 CEP19Q96LK0 163 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 RPF1Q9H9Y2 349 aaKnown RBP22.6■■□□□ 1.21
RNF40-201ENST00000324685 PAMP19021 973 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 ALKBH5Q6P6C2 394 aaKnown RBP22.6■■□□□ 1.21
RNF40-201ENST00000324685 SPAG7O75391 227 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 HSPA4LO95757 839 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 SLC4A1P02730 911 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 NOP9Q86U38 636 aaKnown RBP22.59■■□□□ 1.21
RNF40-201ENST00000324685 KLC2Q9H0B6 622 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 TMEM60Q9H2L4 133 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 ATP5HO75947 161 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 MTERF2Q49AM1 385 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 NFU1Q9UMS0 254 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 SYNGAP1Q96PV0 1343 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 CD58P19256 250 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 NR1H3Q13133 447 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 TBC1D10BQ4KMP7 808 aaPredicted RBP22.59■■□□□ 1.21
RNF40-201ENST00000324685 ERICH1Q86X53 443 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 MIF4GDA9UHW6 222 aaKnown RBP22.59■■□□□ 1.21
RNF40-201ENST00000324685 RESP18Q5W5W9 173 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 ABCA5Q8WWZ7 1642 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 YWHAHQ04917 246 aaPredicted RBP22.59■■□□□ 1.21
RNF40-201ENST00000324685 ZBTB18Q99592 522 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 ANTXR1Q9H6X2 564 aa22.59■■□□□ 1.21
RNF40-201ENST00000324685 GDF11O95390 407 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 LDHAP00338 332 aaKnown RBP22.58■■□□□ 1.21
RNF40-201ENST00000324685 FGGP02679 453 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 TRMT2AQ8IZ69 625 aaKnown RBP22.58■■□□□ 1.21
RNF40-201ENST00000324685 FAF2Q96CS3 445 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 PUS7LQ9H0K6 701 aaKnown RBP22.58■■□□□ 1.21
RNF40-201ENST00000324685 NOP53Q9NZM5 478 aaKnown RBP22.58■■□□□ 1.21
RNF40-201ENST00000324685 ARL4CP56559 192 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 PROSER3Q2NL68 480 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 RNF139Q8WU17 664 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 RBM41Q96IZ5 413 aaKnown RBP22.58■■□□□ 1.21
RNF40-201ENST00000324685 VPS39Q96JC1 886 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 TRIM55Q9BYV6 548 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 CEP72Q9P209 647 aa22.58■■□□□ 1.21
RNF40-201ENST00000324685 CLRN2A0PK11 232 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 PMLP29590 882 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 POLE2P56282 527 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 NUGGCQ68CJ6 796 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 SARM1Q6SZW1 724 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 PRKAB2O43741 272 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 TADA3O75528 432 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 PSMA2P25787 234 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 EPHB1P54762 984 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 OCRLQ01968 901 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 CAV1Q03135 178 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 MSTO1Q9BUK6 570 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 PITPNM3Q9BZ71 974 aa22.58■■□□□ 1.2
RNF40-201ENST00000324685 MDM2Q00987 491 aaPredicted RBP22.57■■□□□ 1.2
RNF40-201ENST00000324685 CYP27A1Q02318 531 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 FSCBQ5H9T9 825 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 TRIML2Q8N7C3 387 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 MORC4Q8TE76 937 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 BBOX1O75936 387 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 SLC13A4Q9UKG4 626 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 COPEO14579 308 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 WDR75Q8IWA0 830 aaKnown RBP22.57■■□□□ 1.2
RNF40-201ENST00000324685 POLR3CQ9BUI4 534 aaPredicted RBP22.57■■□□□ 1.2
RNF40-201ENST00000324685 ZSWIM5Q9P217 1185 aa22.57■■□□□ 1.2
RNF40-201ENST00000324685 ABTB1Q969K4 478 aaPredicted RBP22.57■■□□□ 1.2
RNF40-201ENST00000324685 SCHIP1Q9P0W5 487 aaPredicted RBP22.57■■□□□ 1.2
RNF40-201ENST00000324685 G3BP2Q9UN86 482 aaKnown RBP22.57■■□□□ 1.2
RNF40-201ENST00000324685 ARHGDIAP52565 204 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 UBE2SQ16763 222 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 SUPT20HL1Q3ZLR7 823 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 OSBP2Q969R2 916 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 ACSL3O95573 720 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 TRMT10CQ7L0Y3 403 aaKnown RBP22.56■■□□□ 1.2
RNF40-201ENST00000324685 TTC13Q8NBP0 860 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.56■■□□□ 1.2
RNF40-201ENST00000324685 SAYSD1Q9NPB0 183 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 MMEP08473 750 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 HSPH1Q92598 858 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 ZWILCHQ9H900 591 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 A0A087WWV3 80 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 GRAMD1BQ3KR37 738 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 UNC13DQ70J99 1090 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 SUN2Q9UH99 717 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 SLC8A2Q9UPR5 921 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 PAPOLAP51003 745 aaKnown RBP22.56■■□□□ 1.2
RNF40-201ENST00000324685 AP3B2Q13367 1082 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 PRPF38AQ8NAV1 312 aaKnown RBP22.56■■□□□ 1.2
RNF40-201ENST00000324685 MRPL40Q9NQ50 206 aaKnown RBP22.56■■□□□ 1.2
RNF40-201ENST00000324685 PI4KBQ9UBF8 816 aa22.56■■□□□ 1.2
RNF40-201ENST00000324685 PNMA6AP0CW24 399 aaPredicted RBP22.55■■□□□ 1.2
RNF40-201ENST00000324685 USP17L2Q6R6M4 530 aa22.55■■□□□ 1.2
RNF40-201ENST00000324685 N4BP2L2Q92802 583 aaPredicted RBP22.55■■□□□ 1.2
RNF40-201ENST00000324685 INTUQ9ULD6 942 aa22.55■■□□□ 1.2
RNF40-201ENST00000324685 CTIFO43310 598 aaKnown RBP22.55■■□□□ 1.2
RNF40-201ENST00000324685 NFKBIAP25963 317 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms