RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 GOPCQ9HD26 462 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 NAGPAQ9UK23 515 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 ABCA3Q99758 1704 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 KCNQ2O43526 872 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 CLTAP09496 248 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 ACCSLQ4AC99 568 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 USP17L2Q6R6M4 530 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 DHX37Q8IY37 1157 aaKnown RBP19.5■□□□□ 0.71
PRKCB-202ENST00000321728 CUL5Q93034 780 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 FAM114A2Q9NRY5 505 aa19.5■□□□□ 0.71
PRKCB-202ENST00000321728 BHMG1C9JSJ3 638 aaPredicted RBP19.49■□□□□ 0.71
PRKCB-202ENST00000321728 MMEP08473 750 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 CHN1P15882 459 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 KCNH2Q12809 1159 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 TLDC1Q6P9B6 456 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 DAAM2Q86T65 1068 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 DZIP1Q86YF9 867 aaKnown RBP19.49■□□□□ 0.71
PRKCB-202ENST00000321728 CCDC63Q8NA47 563 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 PIGSQ96S52 555 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 FMO2Q99518 471 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 TRIM51Q9BSJ1 452 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 SPZ1Q9BXG8 430 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 BMP2KQ9NSY1 1161 aaPredicted RBP19.49■□□□□ 0.71
PRKCB-202ENST00000321728 TLDC2A0PJX2 215 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 ADAM9Q13443 819 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 PPP2R5AQ15172 486 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 FOXR2Q6PJQ5 311 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 IRF2BP2Q7Z5L9 587 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 HOOK3Q86VS8 718 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 DNAJC19Q96DA6 116 aa19.49■□□□□ 0.71
PRKCB-202ENST00000321728 RSRC1Q96IZ7 334 aaKnown RBP19.49■□□□□ 0.71
PRKCB-202ENST00000321728 GPR101Q96P66 508 aaPredicted RBP19.49■□□□□ 0.71
PRKCB-202ENST00000321728 BSDC1Q9NW68 430 aaPredicted RBP19.49■□□□□ 0.71
PRKCB-202ENST00000321728 SAP30BPQ9UHR5 308 aaKnown RBP19.49■□□□□ 0.71
PRKCB-202ENST00000321728 SMIM23A6NLE4 172 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 EIF3BP55884 814 aaKnown RBP19.48■□□□□ 0.71
PRKCB-202ENST00000321728 CACNB1Q02641 598 aaPredicted RBP19.48■□□□□ 0.71
PRKCB-202ENST00000321728 FBXO33Q7Z6M2 555 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 LMBR1Q8WVP7 490 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 TLCD1Q96CP7 247 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.48■□□□□ 0.718e-10■□□□□ 11.1
PRKCB-202ENST00000321728 MYH14Q7Z406 1995 aaKnown RBP19.48■□□□□ 0.71
PRKCB-202ENST00000321728 SLC9A1P19634 815 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 ORC2Q13416 577 aaPredicted RBP19.48■□□□□ 0.71
PRKCB-202ENST00000321728 ECM1Q16610 540 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 FLOT1O75955 427 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 FAM133BQ5BKY9 247 aaKnown RBP19.48■□□□□ 0.71
PRKCB-202ENST00000321728 TBC1D1Q86TI0 1168 aaPredicted RBP19.48■□□□□ 0.71
PRKCB-202ENST00000321728 FAXDC2Q96IV6 333 aa19.48■□□□□ 0.71
PRKCB-202ENST00000321728 KIAA1551Q9HCM1 1747 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 CCDC189A1A4V9 331 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 MARCH6O60337 910 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 FGGP02679 453 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 SHBGP04278 402 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 HOXA7P31268 230 aaPredicted RBP19.47■□□□□ 0.71
PRKCB-202ENST00000321728 HIBADHP31937 336 aaKnown RBP19.47■□□□□ 0.71
PRKCB-202ENST00000321728 PRPF4BQ13523 1007 aaKnown RBP19.47■□□□□ 0.71
PRKCB-202ENST00000321728 PDIA5Q14554 519 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 DIXDC1Q155Q3 683 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 TMEM119Q4V9L6 283 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 HERC4Q5GLZ8 1057 aaPredicted RBP19.47■□□□□ 0.71
PRKCB-202ENST00000321728 CENPTQ96BT3 561 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 STAMBPL1Q96FJ0 436 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 TRIM6Q9C030 488 aaPredicted RBP19.47■□□□□ 0.71
PRKCB-202ENST00000321728 ZHX3Q9H4I2 956 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 BZW2Q9Y6E2 419 aaKnown RBP19.47■□□□□ 0.71
PRKCB-202ENST00000321728 MYO1EQ12965 1108 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 GJA10Q969M2 543 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 ZNF317Q96PQ6 595 aaPredicted RBP19.47■□□□□ 0.71
PRKCB-202ENST00000321728 UBA5Q9GZZ9 404 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 SAMD15Q9P1V8 674 aa19.47■□□□□ 0.71
PRKCB-202ENST00000321728 H2AFZP0C0S5 128 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 ZBTB48P10074 688 aaPredicted RBP19.46■□□□□ 0.71
PRKCB-202ENST00000321728 UCHL3P15374 230 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 H2AFVQ71UI9 128 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 ADAT2Q7Z6V5 191 aaKnown RBP19.46■□□□□ 0.71
PRKCB-202ENST00000321728 FMNL3Q8IVF7 1028 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 RASGEF1CQ8N431 466 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 ZNF622Q969S3 477 aaKnown RBP eCLIP19.46■□□□□ 0.711e-8■□□□□ 8.3
PRKCB-202ENST00000321728 ELAC2Q9BQ52 826 aaKnown RBP19.46■□□□□ 0.71
PRKCB-202ENST00000321728 SLC24A3Q9HC58 644 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 SUCLA2Q9P2R7 463 aaPredicted RBP19.46■□□□□ 0.71
PRKCB-202ENST00000321728 CETN3O15182 167 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 PPFIA2O75334 1257 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 LRRC34Q8IZ02 419 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 SYCE1Q8N0S2 351 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 SH3RF3Q8TEJ3 882 aaPredicted RBP19.46■□□□□ 0.71
PRKCB-202ENST00000321728 NSMCE1Q8WV22 266 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 SEC14L1Q92503 715 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 THOC1Q96FV9 657 aaKnown RBP19.46■□□□□ 0.71
PRKCB-202ENST00000321728 HDAC9Q9UKV0 1011 aa19.46■□□□□ 0.71
PRKCB-202ENST00000321728 NPHP3-ACAD11A0A0J9YXS1 232 aa19.45■□□□□ 0.7
PRKCB-202ENST00000321728 VIMP08670 466 aaKnown RBP19.45■□□□□ 0.7
PRKCB-202ENST00000321728 MARSP56192 900 aaKnown RBP19.45■□□□□ 0.7
PRKCB-202ENST00000321728 GRIK5Q16478 980 aa19.45■□□□□ 0.7
PRKCB-202ENST00000321728 CCDC65Q8IXS2 484 aa19.45■□□□□ 0.7
PRKCB-202ENST00000321728 RAB17Q9H0T7 212 aa19.45■□□□□ 0.7
PRKCB-202ENST00000321728 EMILIN3Q9NT22 766 aa19.45■□□□□ 0.7
PRKCB-202ENST00000321728 SLC12A4Q9UP95 1085 aa19.45■□□□□ 0.7
PRKCB-202ENST00000321728 NR2E1Q9Y466 385 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms