RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 ZBTB42B2RXF5 422 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 BACH1O14867 736 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 HBP1O60381 514 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 PSMD10O75832 226 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 CA3P07451 260 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 XBP1P17861 261 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 NONOQ15233 471 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC65-202ENST00000320516 INF2Q27J81 1249 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 PDXDC2PQ6P474 469 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 B3GNT9Q6UX72 402 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC65-202ENST00000320516 TMCO2Q7Z6W1 182 aaPredicted RBP11.24□□□□□ -0.61
CCDC65-202ENST00000320516 GJA10Q969M2 543 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 PCDHA2Q9Y5H9 948 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 SIP14410 1827 aa11.24□□□□□ -0.61
CCDC65-202ENST00000320516 JAK2O60674 1132 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 ARHGEF15O94989 841 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 GJB5O95377 273 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 RPLP2P05387 115 aaKnown RBP11.23□□□□□ -0.61
CCDC65-202ENST00000320516 FOSL2P15408 326 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 EARS2Q5JPH6 523 aaKnown RBP11.23□□□□□ -0.61
CCDC65-202ENST00000320516 PPP2R2DQ66LE6 453 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 MTHFD1LQ6UB35 978 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 MICAL3Q7RTP6 2002 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 RSPH3Q86UC2 560 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 ETNPPLQ8TBG4 499 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 WASF1Q92558 559 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 SEPT8Q92599 483 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 PRDM12Q9H4Q4 367 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 IGSF9BQ9UPX0 1349 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 COL1A2P08123 1366 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 SMIM35A0A1B0GVV1 85 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 WDR64B1ANS9 1081 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 KIF28PB7ZC32 967 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 SLC37A4O43826 429 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 GAS7O60861 476 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 PSAPP07602 524 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 RBM25P49756 843 aaKnown RBP11.23□□□□□ -0.61
CCDC65-202ENST00000320516 ADGRE1Q14246 886 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 LPIN1Q14693 890 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 ZNF484Q5JVG2 852 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 FBXO47Q5MNV8 452 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 PPP4R3AQ6IN85 833 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 BBXQ8WY36 941 aaPredicted RBP11.23□□□□□ -0.61
CCDC65-202ENST00000320516 APBB2Q92870 758 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 TNFRSF25Q93038 417 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 TEKT3Q9BXF9 490 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 IFIH1Q9BYX4 1025 aaKnown RBP11.23□□□□□ -0.61
CCDC65-202ENST00000320516 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
CCDC65-202ENST00000320516 UNC45AQ9H3U1 944 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 DISC1Q9NRI5 854 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 GABBR1Q9UBS5 961 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 LIMCH1Q9UPQ0 1083 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 CDY2AQ9Y6F7 541 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 PRUNE2Q8WUY3 3088 aa11.23□□□□□ -0.61
CCDC65-202ENST00000320516 MYO9BQ13459 2157 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 CCDC194A0A1B0GVG4 234 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.22□□□□□ -0.61
CCDC65-202ENST00000320516 LCHNA4D1U4 455 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 TLL1O43897 1013 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 ZNF862O60290 1169 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 GHRP10912 638 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 KLRC1P26715 233 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 SFNP31947 248 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 MRPS6P82932 125 aaKnown RBP11.22□□□□□ -0.61
CCDC65-202ENST00000320516 TAP1Q03518 808 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 NR5A1Q13285 461 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 PIK3AP1Q6ZUJ8 805 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 NEK8Q86SG6 692 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 MAFAQ8NHW3 353 aaPredicted RBP11.22□□□□□ -0.61
CCDC65-202ENST00000320516 KCNMB3Q9NPA1 279 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 DDX25Q9UHL0 483 aaKnown RBP11.22□□□□□ -0.61
CCDC65-202ENST00000320516 TCEAL9Q9UHQ7 104 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 SQORQ9Y6N5 450 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 UNC80Q8N2C7 3258 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 KDM3AQ9Y4C1 1321 aa11.22□□□□□ -0.61
CCDC65-202ENST00000320516 WDR81Q562E7 1941 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 FAM205CA6NFA0 338 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 KRT2P35908 639 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 JAK3P52333 1124 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 UGCGQ16739 394 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 LETM2Q2VYF4 491 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 IER5Q5VY09 327 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 KIAA0319LQ8IZA0 1049 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 NME8Q8N427 588 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 RDM1Q8NG50 284 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 RAD9AQ99638 391 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 AGO3Q9H9G7 860 aaKnown RBP11.21□□□□□ -0.61
CCDC65-202ENST00000320516 SAMM50Q9Y512 469 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 TRPV2Q9Y5S1 764 aa11.21□□□□□ -0.61
CCDC65-202ENST00000320516 MYH9P35579 1960 aaKnown RBP11.21□□□□□ -0.61
CCDC65-202ENST00000320516 CHMP2AO43633 222 aa11.21□□□□□ -0.62
CCDC65-202ENST00000320516 C22orf31O95567 290 aa11.21□□□□□ -0.62
CCDC65-202ENST00000320516 MMP1P03956 469 aa11.21□□□□□ -0.62
CCDC65-202ENST00000320516 AMHP03971 560 aa11.21□□□□□ -0.62
CCDC65-202ENST00000320516 GCFC2P16383 781 aaKnown RBP11.21□□□□□ -0.62
CCDC65-202ENST00000320516 HTRA4P83105 476 aaPredicted RBP11.21□□□□□ -0.62
CCDC65-202ENST00000320516 TMEM62Q0P6H9 643 aa11.21□□□□□ -0.62
CCDC65-202ENST00000320516 TSHZ1Q6ZSZ6 1077 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms