RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 NPEPPSP55786 919 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 PSMC5P62195 406 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 DYMQ7RTS9 669 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 CCDC43Q96MW1 224 aaKnown RBP17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 TUFT1Q9NNX1 390 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 DNM3Q9UQ16 869 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 RBAK-RBAKDNI3L0D1 243 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 LGALS2P05162 132 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 PLA2G4BP0C869 781 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 ATP4AP20648 1035 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 GNASQ5JWF2 1037 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 MAP3K21Q5TCX8 1036 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 CTU1Q7Z7A3 348 aaKnown RBP17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 RAD54LQ92698 747 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 ZBTB10Q96DT7 871 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 PAGE5Q96GU1 130 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 UNC93B1Q9H1C4 597 aa17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 HMX1Q9NP08 348 aaPredicted RBP17.2■□□□□ 0.34
PDLIM5-202ENST00000318007 SYCE3A1L190 88 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 BIN1O00499 593 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 NKRFO15226 690 aaKnown RBP eCLIP17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 ATG7O95352 703 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 SLFN14P0C7P3 912 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 PRMT2P55345 433 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 CUL4BQ13620 913 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 FSCN1Q16658 493 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 MTERF2Q49AM1 385 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 ANO5Q75V66 913 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 CLSTN2Q9H4D0 955 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 DUSP11O75319 330 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 IGBP1P78318 339 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 DGKDQ16760 1214 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 HYIQ5T013 277 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 TRAPPC12Q8WVT3 735 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 RNPEPQ9H4A4 650 aa17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
PDLIM5-202ENST00000318007 WDR81Q562E7 1941 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 USO1O60763 962 aaKnown RBP17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 POSTNQ15063 836 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 XKR9Q5GH70 373 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 FAM160B1Q5W0V3 765 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 SV2BQ7L1I2 683 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 GPBP1Q86WP2 473 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 RDM1Q8NG50 284 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 EMID1Q96A84 441 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 RNF208Q9H0X6 261 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 ZHX3Q9H4I2 956 aa17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 MAFBQ9Y5Q3 323 aaPredicted RBP17.18■□□□□ 0.34
PDLIM5-202ENST00000318007 CPT1AP50416 773 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 SOX10P56693 466 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 CXCL17Q6UXB2 119 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 NEK9Q8TD19 979 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 CEP170P1Q96L14 293 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 DEFB118Q96PH6 123 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 NACC1Q96RE7 527 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 RUSC1Q9BVN2 902 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 MYH9P35579 1960 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 IGKV6D-21A0A0A0MT36 114 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 ARHGEF35A5YM69 484 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 H3BRB1 525 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 OATP04181 439 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 KRT18P05783 430 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 C4orf19Q8IY42 314 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 C16orf70Q9BSU1 422 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 TUT1Q9H6E5 874 aaKnown RBP17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 SPC25Q9HBM1 224 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 STK17AQ9UEE5 414 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 NRBP1Q9UHY1 535 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 STK24Q9Y6E0 443 aa17.17■□□□□ 0.34
PDLIM5-202ENST00000318007 MYMKA6NI61 221 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 A6NJR5 290 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 SFI1A8K8P3 1242 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 CTAGE5O15320 804 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 PPFIA4O75335 1185 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 IDEP14735 1019 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 RARRES1P49788 294 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 ZSCAN23Q3MJ62 389 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 SMARCAD1Q9H4L7 1026 aa17.16■□□□□ 0.34
PDLIM5-202ENST00000318007 EYA4O95677 639 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 CCL5P13501 91 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 ASIC1P78348 528 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 PLCB4Q15147 1175 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 DDX12PQ92771 950 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 HPS3Q969F9 1004 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 PYM1Q9BRP8 204 aaKnown RBP17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 KBTBD4Q9NVX7 518 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 ERAP1Q9NZ08 941 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 EMSYQ7Z589 1322 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 RSPH10B2B2RC85 870 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 ADAMTS4O75173 837 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 RSPH10BP0C881 870 aa17.15■□□□□ 0.34
PDLIM5-202ENST00000318007 GJA9P57773 515 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms