RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 QARSP47897 775 aaKnown RBP9.79□□□□□ -0.84
CTC1-201ENST00000315684 EPHB1P54762 984 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 MESDQ14696 234 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 FMNL3Q8IVF7 1028 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 BEST2Q8NFU1 509 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 TRPM4Q8TD43 1214 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 HSPH1Q92598 858 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 LPAR1Q92633 364 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 TBC1D22BQ9NU19 505 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 GOLGA6L7A0A1B0GV03 622 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 DDTLA6NHG4 134 aaPredicted RBP9.79□□□□□ -0.84
CTC1-201ENST00000315684 GFPT2O94808 682 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 ZSCAN30Q86W11 494 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 FAM8A1Q9UBU6 413 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 TSR3Q9UJK0 312 aaKnown RBP9.79□□□□□ -0.84
CTC1-201ENST00000315684 BZW2Q9Y6E2 419 aaKnown RBP9.79□□□□□ -0.84
CTC1-201ENST00000315684 MROH2AA6NES4 1674 aa9.79□□□□□ -0.84
CTC1-201ENST00000315684 MAP2P11137 1827 aaKnown RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 N4BP1O75113 896 aaKnown RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 ACTN1P12814 892 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 CAP2P40123 477 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 CUL4BQ13620 913 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 ZNF467Q7Z7K2 595 aaPredicted RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.78□□□□□ -0.84
CTC1-201ENST00000315684 TMEM206Q9H813 350 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 MTMR6Q9Y217 621 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 PRG3Q9Y2Y8 225 aaPredicted RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 LMTK2Q8IWU2 1503 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 CYP2C9P11712 490 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 AP3B2Q13367 1082 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 PFKFB3Q16875 520 aaPredicted RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 CHADLQ6NUI6 762 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 ZNF233A6NK53 670 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 KRT76Q01546 638 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 ADCY1Q08828 1119 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 IER5Q5VY09 327 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 EIF2AK1Q9BQI3 630 aaKnown RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 PHLPP1O60346 1717 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 TNS2Q63HR2 1409 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 HGSO14964 777 aaPredicted RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 HASPINQ8TF76 798 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 GCNT4Q9P109 453 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 FRMPD1Q5SYB0 1578 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 SLU7O95391 586 aaKnown RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 NME3Q13232 169 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 TRIM28Q13263 835 aaKnown RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 UVSSAQ2YD98 709 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 SRBD1Q8N5C6 995 aaKnown RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 KIAA1524Q8TCG1 905 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 SPATA17Q96L03 361 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 CSF1RP07333 972 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 YWHABP31946 246 aaKnown RBP9.78□□□□□ -0.84
CTC1-201ENST00000315684 DGKZQ13574 1117 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 EFCAB12Q6NXP0 572 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 SFR1Q86XK3 245 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 PLA2G12BQ9BX93 195 aa9.78□□□□□ -0.84
CTC1-201ENST00000315684 MANSC4A6NHS7 340 aaPredicted RBP9.77□□□□□ -0.84
CTC1-201ENST00000315684 hCG_1984214I3L0E3 225 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 GIPC1O14908 333 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 SLC12A2P55011 1212 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 KIF23Q02241 960 aaPredicted RBP9.77□□□□□ -0.84
CTC1-201ENST00000315684 ZNF699Q32M78 642 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 USP50Q70EL3 339 aaPredicted RBP9.77□□□□□ -0.84
CTC1-201ENST00000315684 ARMCX2Q7L311 632 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 ZNF713Q8N859 430 aaPredicted RBP9.77□□□□□ -0.84
CTC1-201ENST00000315684 NEDD1Q8NHV4 660 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.84
CTC1-201ENST00000315684 PDGFDQ9GZP0 370 aaPredicted RBP9.77□□□□□ -0.84
CTC1-201ENST00000315684 ZWILCHQ9H900 591 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 SETBP1Q9Y6X0 1596 aa9.77□□□□□ -0.84
CTC1-201ENST00000315684 C17orf102A2RUQ5 167 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 SLC25A27O95847 323 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 IFNAR1P17181 557 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 GUCY1A2P33402 732 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 LONRF2Q1L5Z9 754 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 NUP58Q9BVL2 599 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 MYPNQ86TC9 1320 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 SHTN1A0MZ66 631 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 NR3C2P08235 984 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 CTAGE3PQ8IX95 158 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 NMRK2Q9NPI5 230 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 NOC2LQ9Y3T9 749 aaKnown RBP9.77□□□□□ -0.85
CTC1-201ENST00000315684 ARHGEF37A1IGU5 675 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 CLGNO14967 610 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 BACE1P56817 501 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 SEPT6Q14141 434 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 SECISBP2LQ93073 1101 aaKnown RBP9.77□□□□□ -0.85
CTC1-201ENST00000315684 ERO1AQ96HE7 468 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 POLR3EQ9NVU0 708 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 ABCC12Q96J65 1359 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 LAD1O00515 517 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 POLR2BP30876 1174 aaKnown RBP9.77□□□□□ -0.85
CTC1-201ENST00000315684 ZNF667Q5HYK9 610 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 ARRDC4Q8NCT1 418 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 HAUS1Q96CS2 278 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 CALN1Q9BXU9 219 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 IFIH1Q9BYX4 1025 aaKnown RBP9.77□□□□□ -0.85
CTC1-201ENST00000315684 FANCLQ9NW38 375 aa9.77□□□□□ -0.85
CTC1-201ENST00000315684 MTRF1LQ9UGC7 380 aaKnown RBP9.77□□□□□ -0.85
CTC1-201ENST00000315684 PTPN22Q9Y2R2 807 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms