RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 P4HBP07237 508 aaKnown RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 NMT1P30419 496 aaKnown RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 PARVGQ9HBI0 331 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 ADARB2Q9NS39 739 aaKnown RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 TBC1D22BQ9NU19 505 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 ZNHIT6Q9NWK9 470 aaKnown RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 RNF181Q9P0P0 153 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 SAMM50Q9Y512 469 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 MYH11P35749 1972 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 URI1O94763 535 aaPredicted RBP20.25■□□□□ 0.83
CCDC43-201ENST00000315286 NCBP1Q09161 790 aaKnown RBP20.25■□□□□ 0.83
CCDC43-201ENST00000315286 ZSWIM4Q9H7M6 989 aa20.25■□□□□ 0.83
CCDC43-201ENST00000315286 KCND2Q9NZV8 630 aa20.25■□□□□ 0.83
CCDC43-201ENST00000315286 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.25■□□□□ 0.83
CCDC43-201ENST00000315286 SNCAIPQ9Y6H5 919 aa20.25■□□□□ 0.83
CCDC43-201ENST00000315286 ARHGEF35A5YM69 484 aa20.25■□□□□ 0.83
CCDC43-201ENST00000315286 CALUO43852 315 aaPredicted RBP20.25■□□□□ 0.83
CCDC43-201ENST00000315286 ZNF131P52739 623 aa20.25■□□□□ 0.83
CCDC43-201ENST00000315286 VGLL4Q14135 290 aa20.25■□□□□ 0.83
CCDC43-201ENST00000315286 FIZ1Q96SL8 496 aa20.25■□□□□ 0.83
CCDC43-201ENST00000315286 TYW1Q9NV66 732 aaKnown RBP20.25■□□□□ 0.83
CCDC43-201ENST00000315286 TESPA1A2RU30 521 aaPredicted RBP20.24■□□□□ 0.83
CCDC43-201ENST00000315286 ARHGAP25P42331 645 aa20.24■□□□□ 0.83
CCDC43-201ENST00000315286 MAP3K9P80192 1104 aa20.24■□□□□ 0.83
CCDC43-201ENST00000315286 ARHGAP29Q52LW3 1261 aa20.24■□□□□ 0.83
CCDC43-201ENST00000315286 ZC2HC1CQ53FD0 456 aaPredicted RBP20.24■□□□□ 0.83
CCDC43-201ENST00000315286 VSIG10LQ86VR7 867 aa20.24■□□□□ 0.83
CCDC43-201ENST00000315286 HOXC10Q9NYD6 342 aa20.24■□□□□ 0.83
CCDC43-201ENST00000315286 ASTN1O14525 1302 aa20.24■□□□□ 0.83
CCDC43-201ENST00000315286 SPDYE16A6NNV3 312 aaPredicted RBP20.23■□□□□ 0.83
CCDC43-201ENST00000315286 ADM5C9JUS6 153 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 ATP2A1O14983 1001 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 NR3C2P08235 984 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 GUCY2CP25092 1073 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 SH3D19Q5HYK7 790 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 ERO1AQ96HE7 468 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 TEX13BQ9BXU2 312 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 NHEJ1Q9H9Q4 299 aaPredicted RBP20.23■□□□□ 0.83
CCDC43-201ENST00000315286 ODF2LQ9ULJ1 636 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 WDR90Q96KV7 1748 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 EIF3DO15371 548 aaKnown RBP eCLIP20.23■□□□□ 0.83
CCDC43-201ENST00000315286 KIF5CO60282 957 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 QARSP47897 775 aaKnown RBP20.23■□□□□ 0.83
CCDC43-201ENST00000315286 PADI6Q6TGC4 694 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 LRRN4CLQ8ND94 238 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 ANKRD7Q92527 254 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 DCPSQ96C86 337 aaKnown RBP20.23■□□□□ 0.83
CCDC43-201ENST00000315286 IKZF4Q9H2S9 585 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 SEL1LQ9UBV2 794 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 FAM184BQ9ULE4 1060 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 PLAGL2Q9UPG8 496 aa20.23■□□□□ 0.83
CCDC43-201ENST00000315286 CLIC2O15247 247 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 TGFB1I1O43294 461 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 NR3C1P04150 777 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 CCND2P30279 289 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 HNRNPH3P31942 346 aaKnown RBP20.22■□□□□ 0.83
CCDC43-201ENST00000315286 CDK17Q00537 523 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 PLS1Q14651 629 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 XRRA1Q6P2D8 792 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 ZNF720Q7Z2F6 126 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 FRMD5Q7Z6J6 570 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 NEK11Q8NG66 645 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 CNKSR2Q8WXI2 1034 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCDC43-201ENST00000315286 V9GYY5 206 aaPredicted RBP20.22■□□□□ 0.83
CCDC43-201ENST00000315286 KIAA1217Q5T5P2 1943 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 HIP1RO75146 1068 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 AKAP3O75969 853 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 CCNE2O96020 404 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 HERVK_113P62684 666 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 MAPK7Q13164 816 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 ZNF569Q5MCW4 686 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 ODR4Q5SWX8 454 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 KSR1Q8IVT5 923 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 SULF1Q8IWU6 871 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 FAM178BQ8IXR5 827 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 DAW1Q8N136 415 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 RBM46Q8TBY0 533 aaKnown RBP20.22■□□□□ 0.83
CCDC43-201ENST00000315286 BAP1Q92560 729 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 CRACR2AQ9BSW2 395 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 A1CFQ9NQ94 594 aaKnown RBP20.22■□□□□ 0.83
CCDC43-201ENST00000315286 CYP39A1Q9NYL5 469 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 ZMYM2Q9UBW7 1377 aa20.22■□□□□ 0.83
CCDC43-201ENST00000315286 PTPRFP10586 1907 aa20.21■□□□□ 0.83
CCDC43-201ENST00000315286 RPL13P26373 211 aaKnown RBP20.21■□□□□ 0.83
CCDC43-201ENST00000315286 KCNH2Q12809 1159 aa20.21■□□□□ 0.83
CCDC43-201ENST00000315286 UGCGQ16739 394 aa20.21■□□□□ 0.83
CCDC43-201ENST00000315286 RRAGAQ7L523 313 aa20.21■□□□□ 0.83
CCDC43-201ENST00000315286 CCDC170Q8IYT3 715 aa20.21■□□□□ 0.83
CCDC43-201ENST00000315286 NSUN6Q8TEA1 469 aaKnown RBP20.21■□□□□ 0.83
CCDC43-201ENST00000315286 ACAD9Q9H845 621 aa20.21■□□□□ 0.83
CCDC43-201ENST00000315286 ARMCX3Q9UH62 379 aaPredicted RBP20.21■□□□□ 0.83
CCDC43-201ENST00000315286 DBR1Q9UK59 544 aaKnown RBP20.21■□□□□ 0.83
CCDC43-201ENST00000315286 LRRC53A6NM62 1247 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 NOL4O94818 638 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 LYPLA2O95372 231 aa20.2■□□□□ 0.82
CCDC43-201ENST00000315286 PLEKP08567 350 aaPredicted RBP20.2■□□□□ 0.82
CCDC43-201ENST00000315286 YBX3P16989 372 aaKnown RBP eCLIP20.2■□□□□ 0.827e-9■■■■■ 29.6
CCDC43-201ENST00000315286 CYLC1P35663 651 aaPredicted RBP20.2■□□□□ 0.82
CCDC43-201ENST00000315286 CASP4P49662 377 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms