RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 PDZD4Q76G19 769 aaPredicted RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 STAG2Q8N3U4 1231 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 OSBPL9Q96SU4 736 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 MED10Q9BTT4 135 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 PLAAQ9Y263 795 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 ARHGAP4P98171 946 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 TMED2Q15363 201 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 NFRKBQ6P4R8 1299 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 MIGA2Q7L4E1 593 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 CTDNEP1O95476 244 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 RWDD2BP57060 319 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 TRIP13Q15645 432 aaPredicted RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 MTERF2Q49AM1 385 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 GSPT2Q8IYD1 628 aaKnown RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 ANKRD36BP1Q96IX9 119 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 FAM20AQ96MK3 541 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 ZCCHC17Q9NP64 241 aaKnown RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 INO80Q9ULG1 1556 aaPredicted RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 TDP2O95551 362 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 CCND2P30279 289 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 GGCXP38435 758 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 NEDD1Q8NHV4 660 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 TCP11Q8WWU5 503 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 JPH2Q9BR39 696 aaPredicted RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 PHF20Q9BVI0 1012 aa14.88□□□□□ -0.03
SPAST-201ENST00000315285 ZC3H13Q5T200 1668 aaKnown RBP14.88□□□□□ -0.03
SPAST-201ENST00000315285 CRKP46108 304 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 TFAMQ00059 246 aaKnown RBP14.87□□□□□ -0.03
SPAST-201ENST00000315285 PDCLQ13371 301 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 TRIM68Q6AZZ1 485 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 SEPT14Q6ZU15 432 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 SEPT10Q9P0V9 454 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 LIMA1Q9UHB6 759 aaKnown RBP14.87□□□□□ -0.03
SPAST-201ENST00000315285 TBK1Q9UHD2 729 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 BCAP29Q9UHQ4 241 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 A6NJR5 290 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 CSF1RP07333 972 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 FCER1AP12319 257 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 PEX3P56589 373 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 IRX2Q9BZI1 471 aaPredicted RBP14.87□□□□□ -0.03
SPAST-201ENST00000315285 CAPN11Q9UMQ6 739 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 CEMIPQ8WUJ3 1361 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 KNOP1Q1ED39 458 aaKnown RBP14.87□□□□□ -0.03
SPAST-201ENST00000315285 NME8Q8N427 588 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 CDKL2Q92772 493 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 ZNF512BQ96KM6 892 aaPredicted RBP14.87□□□□□ -0.03
SPAST-201ENST00000315285 CFAP57Q96MR6 1250 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 PLEKHG2Q9H7P9 1386 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 CFAP61Q8NHU2 1237 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 NSUN4Q96CB9 384 aaKnown RBP14.87□□□□□ -0.03
SPAST-201ENST00000315285 EFCC1Q9HA90 598 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 PFDN4Q9NQP4 134 aa14.87□□□□□ -0.03
SPAST-201ENST00000315285 DIS3Q9Y2L1 958 aaKnown RBP14.87□□□□□ -0.03
SPAST-201ENST00000315285 MIF4GDA9UHW6 222 aaKnown RBP14.86□□□□□ -0.03
SPAST-201ENST00000315285 NCK2O43639 380 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 CCHCR1Q8TD31 782 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 NACA2Q9H009 215 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 LRRD1A4D1F6 860 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 DYNLT1P63172 113 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 KCTD2Q14681 263 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 C12orf60Q5U649 245 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 KLHL29Q96CT2 875 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 POTEFA5A3E0 1075 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 FAM196BA6NMK8 535 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 SESN3P58005 492 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 PDIA6Q15084 440 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 C6orf118Q5T5N4 469 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 MAP3K21Q5TCX8 1036 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 POTEGQ6S5H5 508 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 POTEEQ6S8J3 1075 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 DDX23Q9BUQ8 820 aaKnown RBP14.86□□□□□ -0.03
SPAST-201ENST00000315285 CCSER1Q9C0I3 900 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 PODXLO00592 558 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 MCF2LO15068 1137 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 ATP1A1P05023 1023 aaKnown RBP14.86□□□□□ -0.03
SPAST-201ENST00000315285 PSAPP07602 524 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 ADCY2Q08462 1091 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 NUF2Q9BZD4 464 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 NXF1Q9UBU9 619 aaKnown RBP14.86□□□□□ -0.03
SPAST-201ENST00000315285 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
SPAST-201ENST00000315285 SNX24Q9Y343 169 aa14.86□□□□□ -0.03
SPAST-201ENST00000315285 PRELPP51888 382 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 ANKRD40Q6AI12 368 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 TRIM9Q9C026 710 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 POLD4Q9HCU8 107 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 SYNGAP1Q96PV0 1343 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 EXOC1LA0A1B0GW35 172 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 ZNF233A6NK53 670 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 EVI5O60447 810 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 MSH2P43246 934 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 DPYDQ12882 1025 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 QRICH1Q2TAL8 776 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 SESTD1Q86VW0 696 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 CPSF2Q9P2I0 782 aaKnown RBP14.85□□□□□ -0.03
SPAST-201ENST00000315285 A0A0G2JLW4 131 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 BAG2O95816 211 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 CD58P19256 250 aa14.85□□□□□ -0.03
SPAST-201ENST00000315285 GABPAQ06546 454 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms