RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CYP2E1P05181 493 aaPredicted RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 KRT10P13645 584 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 ADD2P35612 726 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 COPB1P53618 953 aaKnown RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 ACTN3Q08043 901 aaPredicted RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 TMED2Q15363 201 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 CCDC117Q8IWD4 279 aaPredicted RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 ZNF713Q8N859 430 aaPredicted RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 GIMAP8Q8ND71 665 aaPredicted RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 VPS54Q9P1Q0 977 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 ABCC6O95255 1503 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 hCG_1642624A0A1W2PR95 340 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 DDAH1O94760 285 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 CD19P15391 556 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 CCND2P30279 289 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 MSH2P43246 934 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 NUDCD3Q8IVD9 361 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 SPICE1Q8N0Z3 855 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 CYTH2Q99418 400 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 TM6SF1Q9BZW5 370 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 GPRC5DQ9NZD1 345 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 RGS2P41220 211 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 SYDE2Q5VT97 1194 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 C16orf87Q6PH81 154 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 SH3GL3Q99963 347 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 hCG_2014768A0A024R1R8 64 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 E7EWF7 191 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 SAT1P21673 171 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 CASP2P42575 452 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 SLCO1A2P46721 670 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 PCYT1AP49585 367 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 FKBP1AP62942 108 aaKnown RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 KRT81Q14533 505 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 COG2Q14746 738 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 TCP11X2Q5H9J9 407 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 C11orf57Q6ZUT1 292 aaPredicted RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 NME8Q8N427 588 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 ARMC2Q8NEN0 867 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 IWS1Q96ST2 819 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 COBLO75128 1261 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 INHBAP08476 426 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 H2AFZP0C0S5 128 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 CXCR5P32302 372 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 PLTPP55058 493 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 KAZNQ674X7 775 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 H2AFVQ71UI9 128 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 CLIC6Q96NY7 704 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 FAM167BQ9BTA0 163 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 DBNLQ9UJU6 430 aaKnown RBP8.84□□□□□ -0.99
VPS41-202ENST00000310301 UBN2Q6ZU65 1347 aa8.84□□□□□ -0.99
VPS41-202ENST00000310301 PRDX5P30044 214 aa8.83□□□□□ -1
VPS41-202ENST00000310301 DHX9Q08211 1270 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 MYOCDQ8IZQ8 938 aa8.83□□□□□ -1
VPS41-202ENST00000310301 PRPF38AQ8NAV1 312 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 ARRDC4Q8NCT1 418 aa8.83□□□□□ -1
VPS41-202ENST00000310301 DPF3Q92784 378 aa8.83□□□□□ -1
VPS41-202ENST00000310301 MAGOHBQ96A72 148 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 HTATIP2Q9BUP3 242 aa8.83□□□□□ -1
VPS41-202ENST00000310301 PSTPIP2Q9H939 334 aa8.83□□□□□ -1
VPS41-202ENST00000310301 TPCN1Q9ULQ1 816 aa8.83□□□□□ -1
VPS41-202ENST00000310301 ZNF148Q9UQR1 794 aa8.83□□□□□ -1
VPS41-202ENST00000310301 DAAM1Q9Y4D1 1078 aa8.83□□□□□ -1
VPS41-202ENST00000310301 PPME1Q9Y570 386 aa8.83□□□□□ -1
VPS41-202ENST00000310301 CLIC4Q9Y696 253 aa8.83□□□□□ -1
VPS41-202ENST00000310301 ARHGEF28Q8N1W1 1705 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 GNGT2O14610 69 aa8.83□□□□□ -1
VPS41-202ENST00000310301 FKTNO75072 461 aa8.83□□□□□ -1
VPS41-202ENST00000310301 GPC4O75487 556 aa8.83□□□□□ -1
VPS41-202ENST00000310301 CAPN15O75808 1086 aa8.83□□□□□ -1
VPS41-202ENST00000310301 LMNAP02545 664 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 YWHAGP61981 247 aaKnown RBP eCLIP8.83□□□□□ -1
VPS41-202ENST00000310301 DYNLL1P63167 89 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 SLC7A5Q01650 507 aa8.83□□□□□ -1
VPS41-202ENST00000310301 SLMAPQ14BN4 828 aa8.83□□□□□ -1
VPS41-202ENST00000310301 SEPT8Q92599 483 aa8.83□□□□□ -1
VPS41-202ENST00000310301 FTOQ9C0B1 505 aaKnown RBP eCLIP8.83□□□□□ -1
VPS41-202ENST00000310301 CACYBPQ9HB71 228 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 SUFUQ9UMX1 484 aa8.83□□□□□ -1
VPS41-202ENST00000310301 PACSIN2Q9UNF0 486 aaPredicted RBP8.83□□□□□ -1
VPS41-202ENST00000310301 SOWAHDA6NJG2 315 aa8.83□□□□□ -1
VPS41-202ENST00000310301 KLRF2D3W0D1 207 aa8.83□□□□□ -1
VPS41-202ENST00000310301 GARSP41250 739 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 CDK8P49336 464 aa8.83□□□□□ -1
VPS41-202ENST00000310301 BFSP1Q12934 665 aa8.83□□□□□ -1
VPS41-202ENST00000310301 GRAMD1BQ3KR37 738 aa8.83□□□□□ -1
VPS41-202ENST00000310301 GALNT17Q6IS24 598 aa8.83□□□□□ -1
VPS41-202ENST00000310301 RCSD1Q6JBY9 416 aa8.83□□□□□ -1
VPS41-202ENST00000310301 REXO1Q8N1G1 1221 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 NKX2-3Q8TAU0 364 aa8.83□□□□□ -1
VPS41-202ENST00000310301 KCNV2Q8TDN2 545 aa8.83□□□□□ -1
VPS41-202ENST00000310301 CCDC68Q9H2F9 335 aa8.83□□□□□ -1
VPS41-202ENST00000310301 EIF4E1BA6NMX2 242 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 DDX39AO00148 427 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 CXCL11O14625 94 aa8.83□□□□□ -1
VPS41-202ENST00000310301 RPN1P04843 607 aaKnown RBP8.83□□□□□ -1
VPS41-202ENST00000310301 ESRRAP11474 423 aaPredicted RBP8.83□□□□□ -1
VPS41-202ENST00000310301 ACRBPQ8NEB7 543 aa8.83□□□□□ -1
VPS41-202ENST00000310301 NRBF2Q96F24 287 aa8.83□□□□□ -1
VPS41-202ENST00000310301 ELAC2Q9BQ52 826 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms