RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 BCL9O00512 1426 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 GFPT2O94808 682 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CLSTN1O94985 981 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 PLA2G4BP0C869 781 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 UCHL3P15374 230 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CDK8P49336 464 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 MAP2K1Q02750 393 aaPredicted RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 C10orf76Q5T2E6 689 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 C6orf89Q6UWU4 347 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 TMC3Q7Z5M5 1100 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 TXNRD3Q86VQ6 643 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 ACTRT1Q8TDG2 376 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CALR3Q96L12 384 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 ANKRD2Q9GZV1 360 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CNOT10Q9H9A5 744 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 INTS9Q9NV88 658 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 BZW2Q9Y6E2 419 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CASZ1Q86V15 1759 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 ADAMTSL3P82987 1691 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CICQ96RK0 1608 aaPredicted RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 POTEB3A0JP26 581 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 TMEM110-MUSTN1A8MSY1 372 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 POTECB2RU33 542 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 KIF1CO43896 1103 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CAND2O75155 1236 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 TRIM37O94972 964 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 LDHCP07864 332 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 CHN1P15882 459 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 GSTO1P78417 241 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 POTEBQ6S5H4 581 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 NBPF5PQ86XG9 351 aaPredicted RBP12.14□□□□□ -0.47
PTPN7-201ENST00000309017 TPCN2Q8NHX9 752 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 MGARPQ8TDB4 240 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 NT5C3AQ9H0P0 336 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 AIPL1Q9NZN9 384 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 MCM8Q9UJA3 840 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 DAAM1Q9Y4D1 1078 aa12.14□□□□□ -0.47
PTPN7-201ENST00000309017 ZNF211Q13398 564 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-201ENST00000309017 EP400NLQ6ZTU2 488 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 C1orf131Q8NDD1 294 aaKnown RBP12.13□□□□□ -0.47
PTPN7-201ENST00000309017 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 CTNNBL1Q8WYA6 563 aaPredicted RBP12.13□□□□□ -0.47
PTPN7-201ENST00000309017 TATDN2Q93075 761 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 TACO1Q9BSH4 297 aaKnown RBP12.13□□□□□ -0.47
PTPN7-201ENST00000309017 SLITRK6Q9H5Y7 841 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 F8VZ95 297 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 KCNQ4P56696 695 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 PDIA5Q14554 519 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 MTMR9Q96QG7 549 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 GGT7Q9UJ14 662 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 DOCK2Q92608 1830 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 BCORQ6W2J9 1755 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 DR1Q01658 176 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 MYO1EQ12965 1108 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 C3orf20Q8ND61 904 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 NEK9Q8TD19 979 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 NSRP1Q9H0G5 558 aaKnown RBP12.13□□□□□ -0.47
PTPN7-201ENST00000309017 GCNT4Q9P109 453 aa12.13□□□□□ -0.47
PTPN7-201ENST00000309017 ZNF142P52746 1687 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-201ENST00000309017 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
PTPN7-201ENST00000309017 EIF3BP55884 814 aaKnown RBP12.12□□□□□ -0.47
PTPN7-201ENST00000309017 ECM1Q16610 540 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 EMC10Q5UCC4 262 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 WDR66Q8TBY9 1149 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 AZI2Q9H6S1 392 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 SLAIN2Q9P270 581 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 RASAL2Q9UJF2 1139 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 NUP98P52948 1817 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 KDM3AQ9Y4C1 1321 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 CCT8L1PA6NM43 557 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 CCDC169A6NNP5 214 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 H0YGN5 161 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 MEIS1O00470 390 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 CLIC2O15247 247 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 PABPC4Q13310 644 aaKnown RBP eCLIP12.12□□□□□ -0.472e-9■□□□□ 10.3
PTPN7-201ENST00000309017 PICALMQ13492 652 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 PPP2R5AQ15172 486 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 GJB7Q6PEY0 223 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 DNAJC19Q96DA6 116 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 SLC24A3Q9HC58 644 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 ECHS1P30084 290 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 STAT1P42224 750 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 SEPT2Q15019 361 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 SCFD1Q8WVM8 642 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 GLG1Q92896 1179 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 THOC1Q96FV9 657 aaKnown RBP12.12□□□□□ -0.47
PTPN7-201ENST00000309017 GANQ9H2C0 597 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 NOD2Q9HC29 1040 aa12.12□□□□□ -0.47
PTPN7-201ENST00000309017 MPHOSPH10O00566 681 aaKnown RBP12.11□□□□□ -0.47
PTPN7-201ENST00000309017 BTDP43251 543 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
PTPN7-201ENST00000309017 ORC2Q13416 577 aaPredicted RBP12.11□□□□□ -0.47
PTPN7-201ENST00000309017 ITPK1Q13572 414 aa12.11□□□□□ -0.47
PTPN7-201ENST00000309017 SF3B3Q15393 1217 aaKnown RBP12.11□□□□□ -0.47
PTPN7-201ENST00000309017 MEX3CQ5U5Q3 659 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms