RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 IER5Q5VY09 327 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 ZNF589Q86UQ0 364 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-201ENST00000307106 ENAHQ8N8S7 591 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-201ENST00000307106 EVI5LQ96CN4 794 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 MTMR8Q96EF0 704 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 FAM49AQ9H0Q0 323 aaPredicted RBP13.68□□□□□ -0.22
SMIM4-201ENST00000307106 POMKQ9H5K3 350 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 PADI3Q9ULW8 664 aa13.68□□□□□ -0.22
SMIM4-201ENST00000307106 FRMPD4Q14CM0 1322 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 WDR81Q562E7 1941 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 M0QZ92 97 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 RPLP2P05387 115 aaKnown RBP13.67□□□□□ -0.22
SMIM4-201ENST00000307106 ASGR2P07307 311 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 IGBP1P78318 339 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 TMEM62Q0P6H9 643 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 APOBRQ0VD83 1088 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 MARCH8Q5T0T0 291 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 CWF19L1Q69YN2 538 aaKnown RBP13.67□□□□□ -0.22
SMIM4-201ENST00000307106 CES5AQ6NT32 575 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 HOMER1Q86YM7 354 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 COLGALT1Q8NBJ5 622 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 FLCNQ8NFG4 579 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 NECTIN4Q96NY8 510 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 ZSCAN10Q96SZ4 725 aaPredicted RBP13.67□□□□□ -0.22
SMIM4-201ENST00000307106 SENP7Q9BQF6 1050 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 ERAP1Q9NZ08 941 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 PCDHB7Q9Y5E2 793 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 TRPV2Q9Y5S1 764 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 WDR87Q6ZQQ6 2873 aa13.67□□□□□ -0.22
SMIM4-201ENST00000307106 KMT2BQ9UMN6 2715 aaPredicted RBP13.67□□□□□ -0.22
SMIM4-201ENST00000307106 IGSF9BQ9UPX0 1349 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 TBKBP1A7MCY6 615 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 B4E1Z4 1266 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 KLRF2D3W0D1 207 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 ZNF213O14771 459 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 SARSP49591 514 aaKnown RBP13.66□□□□□ -0.22
SMIM4-201ENST00000307106 NT5C2P49902 561 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 C20orf194Q5TEA3 1177 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 KCNG4Q8TDN1 519 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 CASP10Q92851 521 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 TCF25Q9BQ70 676 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 TMX1Q9H3N1 280 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 ENTPD7Q9NQZ7 604 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 HCSTQ9UBK5 93 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 MIA3Q5JRA6 1907 aa13.66□□□□□ -0.22
SMIM4-201ENST00000307106 HIDE1A8MVS5 230 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 ITIH3Q06033 890 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 TRAF1Q13077 416 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 PUM1Q14671 1186 aaKnown RBP eCLIP13.65□□□□□ -0.22
SMIM4-201ENST00000307106 ANGPT1Q15389 498 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 CCDC105Q8IYK2 499 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 KIAA2013Q8IYS2 634 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 TDRD5Q8NAT2 981 aaKnown RBP13.65□□□□□ -0.22
SMIM4-201ENST00000307106 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
SMIM4-201ENST00000307106 MRPS27Q92552 414 aaKnown RBP13.65□□□□□ -0.22
SMIM4-201ENST00000307106 GLG1Q92896 1179 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 ADAM7Q9H2U9 754 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 TYW1Q9NV66 732 aaKnown RBP13.65□□□□□ -0.22
SMIM4-201ENST00000307106 ZSWIM5Q9P217 1185 aa13.65□□□□□ -0.22
SMIM4-201ENST00000307106 PUF60Q9UHX1 559 aaKnown RBP13.65□□□□□ -0.22
SMIM4-201ENST00000307106 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 TPRP12270 2363 aaKnown RBP13.64□□□□□ -0.23
SMIM4-201ENST00000307106 PI15O43692 258 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 LMNAP02545 664 aaKnown RBP13.64□□□□□ -0.23
SMIM4-201ENST00000307106 LAG3P18627 525 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 AOC1P19801 751 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 PLCB3Q01970 1234 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 NFX1Q12986 1120 aaKnown RBP13.64□□□□□ -0.23
SMIM4-201ENST00000307106 NMIQ13287 307 aaPredicted RBP13.64□□□□□ -0.23
SMIM4-201ENST00000307106 TMEM266Q2M3C6 531 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 FAM102BQ5T8I3 360 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 ZDHHC14Q8IZN3 488 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 CNTNAP3BQ96NU0 1288 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 PIGSQ96S52 555 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 CNTNAP3Q9BZ76 1288 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 CELF4Q9BZC1 486 aaKnown RBP13.64□□□□□ -0.23
SMIM4-201ENST00000307106 NGRNQ9NPE2 291 aaKnown RBP13.64□□□□□ -0.23
SMIM4-201ENST00000307106 LIMD1Q9UGP4 676 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 HCFC2Q9Y5Z7 792 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 CEP250Q9BV73 2442 aa13.64□□□□□ -0.23
SMIM4-201ENST00000307106 GSTTP1A0A1W2PQM5 241 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 RRN3P2A6NIE6 340 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 ARP10275 920 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 INSRRP14616 1297 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 MTHFRP42898 656 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 IFIT1BQ5T764 474 aaKnown RBP13.63□□□□□ -0.23
SMIM4-201ENST00000307106 NLRX1Q86UT6 975 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 DTWD2Q8NBA8 298 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 SEPT1Q8WYJ6 367 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 UBAC1Q9BSL1 405 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 SEMA4AQ9H3S1 761 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 SMARCAD1Q9H4L7 1026 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 CWH43Q9H720 699 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
SMIM4-201ENST00000307106 MAD2L2Q9UI95 211 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 EPG5Q9HCE0 2579 aa13.63□□□□□ -0.23
SMIM4-201ENST00000307106 KDM3AQ9Y4C1 1321 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms