RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PLEKP08567 350 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 FDX1P10109 184 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 NR2F2P24468 414 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 HNRNPH3P31942 346 aaKnown RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 MAP3K9P80192 1104 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 APBA1Q02410 837 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 MAPK7Q13164 816 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 COG2Q14746 738 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 CCDC40Q4G0X9 1142 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 ZC2HC1CQ53FD0 456 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 SNRNP48Q6IEG0 339 aaKnown RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 PPP4R3CPQ6ZMV5 832 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 BAP1Q92560 729 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 MMRN2Q9H8L6 949 aa7.23□□□□□ -1.25
USP47-201ENST00000305481 NHEJ1Q9H9Q4 299 aaPredicted RBP7.23□□□□□ -1.25
USP47-201ENST00000305481 RCCD1A6NED2 376 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 URI1O94763 535 aaPredicted RBP7.22□□□□□ -1.25
USP47-201ENST00000305481 KIF20AO95235 890 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 GCNT3O95395 438 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 GNA14O95837 355 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 CCNE2O96020 404 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 MYCLP12524 364 aaPredicted RBP7.22□□□□□ -1.25
USP47-201ENST00000305481 GAP43P17677 238 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 CASQ1P31415 396 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 MIER3Q7Z3K6 550 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 KSR1Q8IVT5 923 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 MYCT1Q8N699 235 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 ERO1AQ96HE7 468 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 PLAGL2Q9UPG8 496 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 SNCAIPQ9Y6H5 919 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 ZNF263O14978 683 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 AKAP3O75969 853 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 P4HBP07237 508 aaKnown RBP7.22□□□□□ -1.25
USP47-201ENST00000305481 CASP4P49662 377 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 CDK17Q00537 523 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 VGLL4Q14135 290 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 UGCGQ16739 394 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 ZNF720Q7Z2F6 126 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 VSIG10LQ86VR7 867 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 CNKSR2Q8WXI2 1034 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 PARVGQ9HBI0 331 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 ARHGAP20Q9P2F6 1191 aa7.22□□□□□ -1.25
USP47-201ENST00000305481 CTDP1Q9Y5B0 961 aaPredicted RBP7.22□□□□□ -1.25
USP47-201ENST00000305481 SPDYE16A6NNV3 312 aaPredicted RBP7.21□□□□□ -1.25
USP47-201ENST00000305481 ATP2A1O14983 1001 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 CETN3O15182 167 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 PEX10O60683 326 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 RGS20O76081 388 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 FAM13AO94988 1023 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 GUCY2CP25092 1073 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 OAZ1P54368 228 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 SUPT20HL1Q3ZLR7 823 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 ARHGEF16Q5VV41 709 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 DPY19L2P1Q6NXN4 242 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 NEK9Q8TD19 979 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 CRACR2AQ9BSW2 395 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 STRA6Q9BX79 667 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 SPON1Q9HCB6 807 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 TYW1Q9NV66 732 aaKnown RBP7.21□□□□□ -1.25
USP47-201ENST00000305481 KCND2Q9NZV8 630 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 PNMA2Q9UL42 364 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.21□□□□□ -1.25
USP47-201ENST00000305481 MRFAP1Q9Y605 127 aa7.21□□□□□ -1.25
USP47-201ENST00000305481 TMEM150BA6NC51 233 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 LRRC53A6NM62 1247 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 ADM5C9JUS6 153 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 CLIC2O15247 247 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 NR3C1P04150 777 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 TSR1Q2NL82 804 aaKnown RBP7.21□□□□□ -1.26
USP47-201ENST00000305481 SH3D19Q5HYK7 790 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 ZNF569Q5MCW4 686 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 TREML2Q5T2D2 321 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 PADI6Q6TGC4 694 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 GPIHBP1Q8IV16 184 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 ZNF397Q8NF99 534 aaPredicted RBP7.21□□□□□ -1.26
USP47-201ENST00000305481 IQCDQ96DY2 449 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 BORCS6Q96GS4 357 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 SH2D3AQ9BRG2 576 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 ZSWIM4Q9H7M6 989 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 TBC1D22BQ9NU19 505 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 TELO2Q9Y4R8 837 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 WDR90Q96KV7 1748 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 PAPPA2Q9BXP8 1791 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 EIF3DO15371 548 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP47-201ENST00000305481 KIF5CO60282 957 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 HIP1RO75146 1068 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 NR3C2P08235 984 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 YBX3P16989 372 aaKnown RBP eCLIP7.21□□□□□ -1.26
USP47-201ENST00000305481 QARSP47897 775 aaKnown RBP7.21□□□□□ -1.26
USP47-201ENST00000305481 KCNH2Q12809 1159 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 ELF2Q15723 593 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 ARHGAP29Q52LW3 1261 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 RRAGAQ7L523 313 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 FRMD5Q7Z6J6 570 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 SLC35F6Q8N357 371 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 LACRTQ9GZZ8 138 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 A1CFQ9NQ94 594 aaKnown RBP7.21□□□□□ -1.26
USP47-201ENST00000305481 CYP39A1Q9NYL5 469 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 ODF2LQ9ULJ1 636 aa7.21□□□□□ -1.26
USP47-201ENST00000305481 TESPA1A2RU30 521 aaPredicted RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms