RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 RIPK1Q13546 671 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 KRT25Q7Z3Z0 450 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 ERICH1Q86X53 443 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 SNX29Q8TEQ0 813 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 ZHX3Q9H4I2 956 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 SLITRK6Q9H5Y7 841 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 RIC8AQ9NPQ8 531 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 IL17RBQ9NRM6 502 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 TMEM260Q9NX78 707 aa14.18□□□□□ -0.14
TVP23A-201ENST00000299866 CES2O00748 559 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 SLC9A1P19634 815 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 UBAP2Q5T6F2 1119 aaKnown RBP14.17□□□□□ -0.14
TVP23A-201ENST00000299866 CCHCR1Q8TD31 782 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 PARD3BQ8TEW8 1205 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 DYDC1Q8WWB3 177 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 KLHL29Q96CT2 875 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 ADAM7Q9H2U9 754 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 PRDM11Q9NQV5 511 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 AIPL1Q9NZN9 384 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 THRAP3Q9Y2W1 955 aaKnown RBP14.17□□□□□ -0.14
TVP23A-201ENST00000299866 IL2RBP14784 551 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 PMS2P54278 862 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 NCALDP61601 193 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 SLC29A2Q14542 456 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 RNF25Q96BH1 459 aaPredicted RBP14.17□□□□□ -0.14
TVP23A-201ENST00000299866 CRNKL1Q9BZJ0 848 aaKnown RBP14.17□□□□□ -0.14
TVP23A-201ENST00000299866 NAGPAQ9UK23 515 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 BCORQ6W2J9 1755 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 PPFIA2O75334 1257 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 ZNF268Q14587 947 aaPredicted RBP14.17□□□□□ -0.14
TVP23A-201ENST00000299866 CALCRLQ16602 461 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 NEK9Q8TD19 979 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 TRIM33Q9UPN9 1127 aa14.17□□□□□ -0.14
TVP23A-201ENST00000299866 RARAP10276 462 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 BRD2P25440 801 aaKnown RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 MMP13P45452 471 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 GNAQP50148 359 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 COASYQ13057 564 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 C11orf91Q3C1V1 193 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 DAGLBQ8NCG7 672 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 ATP8B4Q8TF62 1192 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 RAD54LQ92698 747 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 MLXIPLQ9NP71 852 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 DBR1Q9UK59 544 aaKnown RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 CCDC169A6NNP5 214 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 BHMG1C9JSJ3 638 aaPredicted RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 KRT16P08779 473 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 MAP2K1Q02750 393 aaPredicted RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 KCNH2Q12809 1159 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 ZNF211Q13398 564 aaPredicted RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 GRM4Q14833 912 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 NKX1-1Q15270 411 aaPredicted RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 FAM26FQ5R3K3 315 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 SOGA3Q5TF21 947 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 SPDYE1Q8NFV5 336 aaPredicted RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 U2AF1L4Q8WU68 220 aaKnown RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 GJA10Q969M2 543 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 NSRP1Q9H0G5 558 aaKnown RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 GANQ9H2C0 597 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 MKNK2Q9HBH9 465 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 STK17AQ9UEE5 414 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 DAAM1Q9Y4D1 1078 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 AFF2P51816 1311 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 KLRF2D3W0D1 207 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 EVI5O60447 810 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 DR1Q01658 176 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 CCDC152Q4G0S7 254 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 CDCA2Q69YH5 1023 aaPredicted RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 TRIM68Q6AZZ1 485 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 GALNT17Q6IS24 598 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 MIS18BP1Q6P0N0 1132 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 IRF2BP2Q7Z5L9 587 aa14.16□□□□□ -0.14
TVP23A-201ENST00000299866 EPS8L3Q8TE67 593 aaKnown RBP14.16□□□□□ -0.14
TVP23A-201ENST00000299866 C1orf167Q5SNV9 1468 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 SMNDC1O75940 238 aaKnown RBP eCLIP14.15□□□□□ -0.14
TVP23A-201ENST00000299866 AP1ARQ63HQ0 302 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 TRIM59Q8IWR1 403 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 PROM2Q8N271 834 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 CEP120Q8N960 986 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 ACSBG1Q96GR2 724 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 RAB17Q9H0T7 212 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 EPB41L4BQ9H329 900 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 C6orf50Q9HD87 102 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 FGFR1OP2Q9NVK5 253 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 PNMA3Q9UL41 463 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 KAT6BQ8WYB5 2073 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 TDP2O95551 362 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 H2AFZP0C0S5 128 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 KRT13P13646 458 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 INHBEP58166 350 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 MECOMQ03112 1051 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 ADAM9Q13443 819 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 THEMIS2Q5TEJ8 643 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 KRT79Q5XKE5 535 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 H2AFVQ71UI9 128 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 OTUD6AQ7L8S5 288 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 FBXO25Q8TCJ0 367 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 PABPC3Q9H361 631 aaKnown RBP14.15□□□□□ -0.14
TVP23A-201ENST00000299866 SEMA4AQ9H3S1 761 aa14.15□□□□□ -0.14
TVP23A-201ENST00000299866 SLC5A4Q9NY91 659 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms