RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 CYP3A7P24462 503 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ICAM3P32942 547 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ADCYAP1R1P41586 468 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 SCTRP47872 440 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ITGB3BPQ13352 177 aaPredicted RBP6.71□□□□□ -1.34
SSX3-201ENST00000298396 NCOA4Q13772 614 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 NONOQ15233 471 aaKnown RBP eCLIP6.71□□□□□ -1.34
SSX3-201ENST00000298396 STXBP2Q15833 593 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 PKN2Q16513 984 aaKnown RBP6.71□□□□□ -1.34
SSX3-201ENST00000298396 LY6KQ17RY6 165 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 MFSD14CQ5VZR4 134 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ANO1Q5XXA6 986 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 FAM173BQ6P4H8 233 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 SEPT14Q6ZU15 432 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 KRT25Q7Z3Z0 450 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 FERMT3Q86UX7 667 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 NOSTRINQ8IVI9 506 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ETNPPLQ8TBG4 499 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ITPKCQ96DU7 683 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 MXRA8Q9BRK3 442 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 FTOQ9C0B1 505 aaKnown RBP eCLIP6.71□□□□□ -1.34
SSX3-201ENST00000298396 ABHD16BQ9H3Z7 469 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 VTA1Q9NP79 307 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 PGPEP1Q9NXJ5 209 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 SLC5A4Q9NY91 659 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 NRBP1Q9UHY1 535 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 ZHX1Q9UKY1 873 aaPredicted RBP6.71□□□□□ -1.34
SSX3-201ENST00000298396 GNEQ9Y223 722 aaKnown RBP6.71□□□□□ -1.34
SSX3-201ENST00000298396 PCDHB11Q9Y5F2 797 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 MRVI1Q9Y6F6 885 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 SCN5AQ14524 2016 aa6.71□□□□□ -1.34
SSX3-201ENST00000298396 CCDC194A0A1B0GVG4 234 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 SPATA31C2B4DYI2 1134 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 DHX15O43143 795 aaKnown RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 SEPT4O43236 478 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 SORBS3O60504 671 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 ADAMTS4O75173 837 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 DKK1O94907 266 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 BRD1O95696 1058 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 MYCP01106 439 aaPredicted RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 UBA1P22314 1058 aaKnown RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 USP11P51784 963 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 ARHGAP1Q07960 439 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 TRIM29Q14134 588 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 BECN1Q14457 450 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 CTC1Q2NKJ3 1217 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 Q4G0T1 1027 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 CEP55Q53EZ4 464 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 FOXD4L5Q5VV16 416 aaPredicted RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 MCTP1Q6DN14 999 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 XRRA1Q6P2D8 792 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 C4orf32Q8N8J7 132 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 KDF1Q8NAX2 398 aaPredicted RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 FOXD4L4Q8WXT5 416 aaPredicted RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 HAS1Q92839 578 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 PBXIP1Q96AQ6 731 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 GPRASP2Q96D09 838 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.7□□□□□ -1.34
SSX3-201ENST00000298396 UPF3AQ9H1J1 476 aaKnown RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 TMEM60Q9H2L4 133 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 AGO4Q9HCK5 861 aaKnown RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 KCNMB3Q9NPA1 279 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 JADE2Q9NQC1 790 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 TMPRSS4Q9NRS4 437 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 DDX41Q9UJV9 622 aaKnown RBP6.7□□□□□ -1.34
SSX3-201ENST00000298396 CNPY2Q9Y2B0 182 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 PCDHB6Q9Y5E3 794 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 SYNRGQ9UMZ2 1314 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 TET1Q8NFU7 2136 aa6.7□□□□□ -1.34
SSX3-201ENST00000298396 TNRC18O15417 2968 aaPredicted RBP6.69□□□□□ -1.34
SSX3-201ENST00000298396 H3BQV1 296 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 MSH4O15457 936 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 STAM2O75886 525 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 CCNE2O96020 404 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 F13A1P00488 732 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 ZSCAN22P10073 491 aaPredicted RBP6.69□□□□□ -1.34
SSX3-201ENST00000298396 AKR1A1P14550 325 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 PDCP20941 246 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 ANP32AP39687 249 aaKnown RBP6.69□□□□□ -1.34
SSX3-201ENST00000298396 WDR4P57081 412 aaKnown RBP6.69□□□□□ -1.34
SSX3-201ENST00000298396 NKX3-2P78367 333 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 USP4Q13107 963 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 SAFBQ15424 915 aaKnown RBP eCLIP6.69□□□□□ -1.34
SSX3-201ENST00000298396 LETM2Q2VYF4 491 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 EML3Q32P44 896 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 DUSP28Q4G0W2 176 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 PRR16Q569H4 304 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 TTC38Q5R3I4 469 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 MCTP2Q6DN12 878 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 PPP4R3AQ6IN85 833 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 CCSAPQ6IQ19 270 aaPredicted RBP6.69□□□□□ -1.34
SSX3-201ENST00000298396 MOXD1Q6UVY6 613 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 B3GNT9Q6UX72 402 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 NIPA1Q7RTP0 329 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 NEK8Q86SG6 692 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 PLA2G4DQ86XP0 818 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 MEIOBQ8N635 442 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 KLHDC9Q8NEP7 349 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 SCFD2Q8WU76 684 aa6.69□□□□□ -1.34
SSX3-201ENST00000298396 SLC5A5Q92911 643 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms