RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 EN1Q05925 392 aaPredicted RBP16.17■□□□□ 0.18
SPIDR-201ENST00000297423 PSMD2Q13200 908 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 LONP2Q86WA8 852 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 RREB1Q92766 1687 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 FAM228AQ86W67 206 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 FAXDC2Q96IV6 333 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 BRIP1Q9BX63 1249 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 ATP6V0A4Q9HBG4 840 aa16.17■□□□□ 0.18
SPIDR-201ENST00000297423 CCDC189A1A4V9 331 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 NEFHP12036 1026 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 MECOMQ03112 1051 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 EVX2Q03828 476 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 ALX1Q15699 326 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 MEA1Q16626 185 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 ZNF449Q6P9G9 518 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 TXNRD3Q86VQ6 643 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 ABCF3Q9NUQ8 709 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 UBOX5O94941 541 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 CYP2D6P10635 497 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 PRDX5P30044 214 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 VPS36Q86VN1 386 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 FBF1Q8TES7 1133 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 DDX23Q9BUQ8 820 aaKnown RBP16.16■□□□□ 0.18
SPIDR-201ENST00000297423 TRIM33Q9UPN9 1127 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 NOC2LQ9Y3T9 749 aaKnown RBP16.16■□□□□ 0.18
SPIDR-201ENST00000297423 ACTN1P12814 892 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 TNNI2P48788 182 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 SNX29Q8TEQ0 813 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 CRAMP1Q96RY5 1269 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 OSBPL1AQ9BXW6 950 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 ADAM33Q9BZ11 813 aa16.16■□□□□ 0.18
SPIDR-201ENST00000297423 HERC4Q5GLZ8 1057 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-201ENST00000297423 USP38Q8NB14 1042 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 GLG1Q92896 1179 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 TSC22D3Q99576 134 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 PNPLA7Q6ZV29 1317 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 FGFR4P22455 802 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 DRP2Q13474 957 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 TMTC3Q6ZXV5 915 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 GJA10Q969M2 543 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 TRIM9Q9C026 710 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-201ENST00000297423 CALM1P0DP23 149 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 CALM2P0DP24 149 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 CALM3P0DP25 149 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 NPR1P16066 1061 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 BAG6P46379 1132 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 BIRC3Q13489 604 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 TRPM8Q7Z2W7 1104 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 GIMAP8Q8ND71 665 aaPredicted RBP16.15■□□□□ 0.18
SPIDR-201ENST00000297423 SHISA4Q96DD7 197 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 NEUROG2Q9H2A3 272 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 FGFR1OP2Q9NVK5 253 aa16.15■□□□□ 0.18
SPIDR-201ENST00000297423 ACSL3O95573 720 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 TFAP4Q01664 338 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 DPP8Q6V1X1 898 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-201ENST00000297423 INTS8Q75QN2 995 aaKnown RBP16.14■□□□□ 0.17
SPIDR-201ENST00000297423 SH3GL3Q99963 347 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 H0YIN7 160 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 SHBGP04278 402 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 PDXDC1Q6P996 788 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 CAPN12Q6ZSI9 719 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 GLIS3Q8NEA6 775 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 IFT74Q96LB3 600 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 GDF3Q9NR23 364 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 FAM205AQ6ZU69 1335 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 A0A1W2PRG0 241 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 IFI35P80217 286 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-201ENST00000297423 PLCB4Q15147 1175 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 IFI16Q16666 785 aaKnown RBP16.14■□□□□ 0.17
SPIDR-201ENST00000297423 SLF2Q8IX21 1173 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 ZMYND12Q9H0C1 365 aa16.14■□□□□ 0.17
SPIDR-201ENST00000297423 TMEM266Q2M3C6 531 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 BZW1Q7L1Q6 419 aaKnown RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 YTHDF3Q7Z739 585 aaKnown RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 SEMA6BQ9H3T3 888 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 A1CFQ9NQ94 594 aaKnown RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 C15orf41Q9Y2V0 281 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 LRRD1A4D1F6 860 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 POTEMA6NI47 508 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 TCP11X1B4DZS4 312 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 C21orf2O43822 256 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 OR52Z1P0C646 297 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 POTEAQ6S8J7 498 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 ERICH1Q86X53 443 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 LMNTD2Q8IXW0 634 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 ZNF444Q8N0Y2 327 aaPredicted RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 NSUN4Q96CB9 384 aaKnown RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 SEC63Q9UGP8 760 aaKnown RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 CHORDC1Q9UHD1 332 aaPredicted RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 RASSF10A6NK89 507 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 KRT79Q5XKE5 535 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 ALKBH5Q6P6C2 394 aaKnown RBP16.13■□□□□ 0.17
SPIDR-201ENST00000297423 PIK3R5Q8WYR1 880 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 ETNK1Q9HBU6 452 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 CD209Q9NNX6 404 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 DAAM1Q9Y4D1 1078 aa16.13■□□□□ 0.17
SPIDR-201ENST00000297423 SCN7AQ01118 1682 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms