RNA–Protein interactions for RNA: ENST00000296315.7

ARHGEF3-201, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-201ENST00000296315 CD302Q8IX05 232 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 RDH13Q8NBN7 331 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 CEP72Q9P209 647 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 AMFRQ9UKV5 643 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 GSTTP1A0A1W2PQM5 241 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 E9PMD0 336 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 PPIP5K2O43314 1243 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 PRDX5P30044 214 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 CTCFP49711 727 aaPredicted RBP11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 PLS1Q14651 629 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 RBBP5Q15291 538 aaKnown RBP11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 LRIG3Q6UXM1 1119 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 SMIM5Q71RC9 77 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 TMEM237Q96Q45 408 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 CCSER1Q9C0I3 900 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 MROH5Q6ZUA9 1318 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 H0YGN5 161 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 MEIS1O00470 390 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 LRRN2O75325 713 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 NR2F2P24468 414 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 RAD23BP54727 409 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 KCNH2Q12809 1159 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 CCDC6Q16204 474 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 TLDC1Q6P9B6 456 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 ZNF662Q6ZS27 426 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 TBC1D22AQ8WUA7 517 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 TSC22D3Q99576 134 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 KDM4CQ9H3R0 1056 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 NFS1Q9Y697 457 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 KIF13AQ9H1H9 1805 aa11.24□□□□□ -0.61
ARHGEF3-201ENST00000296315 ECHS1P30084 290 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 CDK17Q00537 523 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 IFI16Q16666 785 aaKnown RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ANKRD20A2Q5SQ80 823 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 HP1BP3Q5SSJ5 553 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ERMARDQ5T6L9 678 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ANKRD20A1Q5TYW2 823 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ANKRD20A3Q5VUR7 823 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 CENPPQ6IPU0 288 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 CCDC105Q8IYK2 499 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 MREGQ8N565 214 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 C6orf50Q9HD87 102 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 CTNNAL1Q9UBT7 734 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 MED1Q15648 1581 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 SSU72P8A0A1W2PR75 194 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 CCDC169A6NNP5 214 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 RASGRF2O14827 1237 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 RTN2O75298 545 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 DNAJC8O75937 253 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 GNAT1P11488 350 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ATP2A2P16615 1042 aaKnown RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 UBE2SQ16763 222 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 GLYCTKQ8IVS8 523 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 PIGSQ96S52 555 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 SH3GL3Q99963 347 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 GPCPD1Q9NPB8 672 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 NIP7Q9Y221 180 aaKnown RBP eCLIP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 SFI1A8K8P3 1242 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 PJA2O43164 708 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 FLOT1O75955 427 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 TNFRSF8P28908 595 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 STX2P32856 288 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 USP11P51784 963 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 FIGNQ5HY92 759 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 AGBL2Q5U5Z8 902 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 INTS8Q75QN2 995 aaKnown RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 PHLDB2Q86SQ0 1253 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ZSCAN29Q8IWY8 852 aaPredicted RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 REXO1Q8N1G1 1221 aaKnown RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 FBF1Q8TES7 1133 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 RUBCNQ92622 972 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 C18orf8Q96DM3 657 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 BTG4Q9NY30 223 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 KIAA1024Q9UPX6 916 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 C4BP0C0L5 1744 aa11.23□□□□□ -0.61
ARHGEF3-201ENST00000296315 ARHGAP23Q9P227 1491 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 NCALDP61601 193 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 SUSD4Q5VX71 490 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 UNC13DQ70J99 1090 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 MAPKAPK5Q8IW41 473 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 CNOT10Q9H9A5 744 aaKnown RBP11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 ERVK-5Q9HDB9 667 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 CETN3O15182 167 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 NOL4O94818 638 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 SUN1O94901 812 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 YY1P25490 414 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 GRB10Q13322 594 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 ZFYVE27Q5T4F4 411 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 ZNF746Q6NUN9 644 aaPredicted RBP11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 ARMC9Q7Z3E5 817 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 GPBP1Q86WP2 473 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 PBKQ96KB5 322 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 C7orf25Q9BPX7 421 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 PNPLA7Q6ZV29 1317 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 A0A1W2PRG0 241 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 CYTH3O43739 400 aa11.22□□□□□ -0.61
ARHGEF3-201ENST00000296315 KLRK1P26718 216 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms