RNA–Protein interactions for RNA: ENST00000296273.6

RFC4-201, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC4, Length 1,384 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-201ENST00000296273 ATP9AO75110 1047 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 DDAH1O94760 285 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 MARK3P27448 753 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 MTMR1Q13613 665 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 CAMK1Q14012 370 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 MARCH8Q5T0T0 291 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 RNF20Q5VTR2 975 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 CLEC17AQ6ZS10 378 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 EFHBQ8N7U6 833 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 SPPL3Q8TCT6 385 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 PIBF1Q8WXW3 757 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 KCNB2Q92953 911 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 SENP2Q9HC62 589 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 TELO2Q9Y4R8 837 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 DOCK5Q9H7D0 1870 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 MUC6Q6W4X9 2439 aa12.07□□□□□ -0.48
RFC4-201ENST00000296273 SPDYE3A6NKU9 549 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 LINC01565O15544 149 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 ITGB1P05556 798 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 CD52P31358 61 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 GTF2F1P35269 517 aaKnown RBP eCLIP12.06□□□□□ -0.48
RFC4-201ENST00000296273 COASYQ13057 564 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 ZNF654Q8IZM8 581 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 CRIPAKQ8N1N5 446 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 TMTC2Q8N394 836 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 SMRP1Q8NCR6 262 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 IGDCC4Q8TDY8 1250 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 AZI2Q9H6S1 392 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 PSTPIP2Q9H939 334 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 AGO3Q9H9G7 860 aaKnown RBP12.06□□□□□ -0.48
RFC4-201ENST00000296273 TRPV2Q9Y5S1 764 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 UBIAD1Q9Y5Z9 338 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
RFC4-201ENST00000296273 ATG2AQ2TAZ0 1938 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 TTC3P53804 2025 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
RFC4-201ENST00000296273 IGSF9BQ9UPX0 1349 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 KDM3AQ9Y4C1 1321 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 SCG2P13521 617 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 INSRRP14616 1297 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 ITGB5P18084 799 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 NEK4P51957 841 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 PTPN5P54829 565 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 IGBP1P78318 339 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 UBE3AQ05086 875 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 PAK2Q13177 524 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 SKOR2Q2VWA4 1001 aaPredicted RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 TRIM67Q6ZTA4 783 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 NME8Q8N427 588 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 POF1BQ8WVV4 589 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 LINC01599Q8WXQ3 324 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 LSG1Q9H089 658 aaKnown RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 JADE2Q9NQC1 790 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 LRFN2Q9ULH4 789 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 PADI3Q9ULW8 664 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 SMIM35A0A1B0GVV1 85 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 LOC730098B7Z3J9 87 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 GOLGA6L22H0YM25 854 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 CSPG5O95196 566 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 CALM1P0DP23 149 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 CALM2P0DP24 149 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 CALM3P0DP25 149 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 PSMA5P28066 241 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 MCM4P33991 863 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 ANTXR2P58335 489 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 PTH1RQ03431 593 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 CBX2Q14781 532 aaPredicted RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 ODR4Q5SWX8 454 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 PLPPR4Q7Z2D5 763 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 RTN4RL1Q86UN2 441 aaPredicted RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 TEX2Q8IWB9 1127 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 SUGP1Q8IWZ8 645 aaKnown RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 MB21D2Q8IYB1 491 aaPredicted RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 PBXIP1Q96AQ6 731 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 CDCA3Q99618 268 aaPredicted RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 FAM49AQ9H0Q0 323 aaPredicted RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 LY9Q9HBG7 655 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 JPH1Q9HDC5 661 aaPredicted RBP12.05□□□□□ -0.48
RFC4-201ENST00000296273 AAASQ9NRG9 546 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 CLEC1BQ9P126 229 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 SLC9A2Q9UBY0 812 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 TRPC6Q9Y210 931 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 PCDHA2Q9Y5H9 948 aa12.05□□□□□ -0.48
RFC4-201ENST00000296273 NFASCO94856 1347 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 TMEM221A6NGB7 291 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 CCDC69A6NI79 296 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 M0R296 226 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 ATF7P17544 494 aaPredicted RBP12.04□□□□□ -0.48
RFC4-201ENST00000296273 DNAJB1P25685 340 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 NRIP1P48552 1158 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 SLC26A2P50443 739 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 ZXDAP98168 799 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 CUL4AQ13619 759 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 KRT32Q14532 448 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 GSE1Q14687 1217 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 TSGA10IPQ3SY00 556 aa12.04□□□□□ -0.48
RFC4-201ENST00000296273 PAN2Q504Q3 1202 aaKnown RBP12.04□□□□□ -0.48
RFC4-201ENST00000296273 PDE12Q6L8Q7 609 aaKnown RBP12.04□□□□□ -0.48
RFC4-201ENST00000296273 ADGRD2Q7Z7M1 963 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms