RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 MIPOL1Q8TD10 442 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 EDEM3Q9BZQ6 932 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 SLC12A6Q9UHW9 1150 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 SYNGAP1Q96PV0 1343 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 ZNF335Q9H4Z2 1342 aaPredicted RBP13.79□□□□□ -0.2
PTCD1-201ENST00000292478 TXNDC9O14530 226 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 NNTQ13423 1086 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 CACYBPQ9HB71 228 aaKnown RBP13.79□□□□□ -0.2
PTCD1-201ENST00000292478 MID2Q9UJV3 735 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 PNMA3Q9UL41 463 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 A0A1W2PQC6 194 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 WDR64B1ANS9 1081 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 PRPSAP2O60256 369 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 LUC7L3O95232 432 aaKnown RBP13.79□□□□□ -0.2
PTCD1-201ENST00000292478 NR3C1P04150 777 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 MMP10P09238 476 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 ECE1P42892 770 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 USP11P51784 963 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 ATP2C1P98194 919 aaPredicted RBP13.79□□□□□ -0.2
PTCD1-201ENST00000292478 CYP27A1Q02318 531 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 PLCB4Q15147 1175 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 SNCBQ16143 134 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 ARMCX2Q7L311 632 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
PTCD1-201ENST00000292478 NEDD1Q8NHV4 660 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 ZNF341Q9BYN7 854 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 DNAJC12Q9UKB3 198 aa13.79□□□□□ -0.2
PTCD1-201ENST00000292478 CAMSAP1Q5T5Y3 1602 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 GOLGA8SH3BPF8 625 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 PPARDQ03181 441 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 XXYLT1Q8NBI6 393 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 TRIM56Q9BRZ2 755 aaKnown RBP13.78□□□□□ -0.2
PTCD1-201ENST00000292478 FAM170AA1A519 330 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 EIF2AK2P19525 551 aaKnown RBP13.78□□□□□ -0.2
PTCD1-201ENST00000292478 PRCPP42785 496 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 TNFAIP2Q03169 654 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 KCNB1Q14721 858 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 DARS2Q6PI48 645 aaKnown RBP13.78□□□□□ -0.2
PTCD1-201ENST00000292478 RAB44Q7Z6P3 723 aaPredicted RBP13.78□□□□□ -0.2
PTCD1-201ENST00000292478 ZNF710Q8N1W2 664 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 NBPF3Q9H094 633 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 HOXC10Q9NYD6 342 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 ADAMTS1Q9UHI8 967 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 RASGRF2O14827 1237 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 GSTA1P08263 222 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 GSTA2P09210 222 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 COASYQ13057 564 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 ATG9AQ7Z3C6 839 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 MORC4Q8TE76 937 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 NLRP7Q8WX94 980 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 PDLIM2Q96JY6 352 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 ZMYND12Q9H0C1 365 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 CPSF2Q9P2I0 782 aaKnown RBP13.78□□□□□ -0.2
PTCD1-201ENST00000292478 CXCR5P32302 372 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 MTMR1Q13613 665 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 DBN1Q16643 649 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 PTPN21Q16825 1174 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 OXER1Q8TDS5 423 aa13.78□□□□□ -0.2
PTCD1-201ENST00000292478 CELF1Q92879 486 aaKnown RBP13.78□□□□□ -0.2
PTCD1-201ENST00000292478 ACTR5Q9H9F9 607 aaPredicted RBP13.78□□□□□ -0.2
PTCD1-201ENST00000292478 GRID2IPA4D2P6 1211 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 SNX1Q13596 522 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 NAALADL2Q58DX5 795 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 FAM149B1Q96BN6 582 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 CEP95Q96GE4 821 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 LRRC4Q9HBW1 653 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 PEX3P56589 373 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 KCNQ4P56696 695 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 CAV1Q03135 178 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 KNOP1Q1ED39 458 aaKnown RBP13.77□□□□□ -0.2
PTCD1-201ENST00000292478 OR6B2Q6IFH4 312 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 RBM41Q96IZ5 413 aaKnown RBP13.77□□□□□ -0.2
PTCD1-201ENST00000292478 APOL6Q9BWW8 343 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 ABCB6Q9NP58 842 aa13.77□□□□□ -0.2
PTCD1-201ENST00000292478 TYW5A2RUC4 315 aaKnown RBP13.77□□□□□ -0.21
PTCD1-201ENST00000292478 MT-ND3P03897 115 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 ZSCAN20P17040 1043 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-201ENST00000292478 IFRD2Q12894 506 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-201ENST00000292478 STXBP2Q15833 593 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 KRT39Q6A163 491 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 SFR1Q86XK3 245 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 HVCN1Q96D96 273 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 CEP152O94986 1710 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 GPC4O75487 556 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 TJP3O95049 919 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 LIG3P49916 1009 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 CENPUQ71F23 418 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 ERICH1Q86X53 443 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 SP8Q8IXZ3 490 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 CFAP61Q8NHU2 1237 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 NXF1Q9UBU9 619 aaKnown RBP13.77□□□□□ -0.21
PTCD1-201ENST00000292478 ZMYND10O75800 440 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 S100BP04271 92 aaPredicted RBP13.77□□□□□ -0.21
PTCD1-201ENST00000292478 ACTN1P12814 892 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 CEP120Q8N960 986 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 TTC13Q8NBP0 860 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 HAUS8Q9BT25 410 aa13.77□□□□□ -0.21
PTCD1-201ENST00000292478 NR1D1P20393 614 aa13.76□□□□□ -0.21
PTCD1-201ENST00000292478 GPC5P78333 572 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms