RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 HSD17B14Q9BPX1 270 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 PACSIN1Q9BY11 444 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 ASTN1O14525 1302 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 NR3C1P04150 777 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 MYBL2P10244 700 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 NMT1P30419 496 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 ZC2HC1CQ53FD0 456 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 ZNF772Q68DY9 489 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 DNAAF5Q86Y56 855 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 OGFOD1Q8N543 542 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 FAM151AQ8WW52 585 aa20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 SYN2Q92777 582 aaPredicted RBP20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 NUCKS1Q9H1E3 243 aaKnown RBP20.17■□□□□ 0.82
SHKBP1-201ENST00000291842 CALUO43852 315 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 TUBBP07437 444 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 CYP2C19P33261 490 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 MYCT1Q8N699 235 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 HDAC7Q8WUI4 952 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 CCDC102AQ96A19 550 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 NOX5Q96PH1 765 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 PCDHB13Q9Y5F0 798 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 RBAK-RBAKDNI3L0D1 243 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 PDXKO00764 312 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 PHACTR2O75167 634 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 PSMD10O75832 226 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 XRCC5P13010 732 aaKnown RBP20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 ASIC2Q16515 512 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 KLHDC7AQ5VTJ3 777 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 FRMD5Q7Z6J6 570 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 TLR10Q9BXR5 811 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 VPS18Q9P253 973 aa20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 WRAP73Q9P2S5 460 aaPredicted RBP20.16■□□□□ 0.82
SHKBP1-201ENST00000291842 GAS7O60861 476 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 AFPP02771 609 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 ARP10275 920 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 KLRC1P26715 233 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 GPS2Q13227 327 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 MS4A14Q96JA4 679 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 TYW1Q9NV66 732 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 HYOU1Q9Y4L1 999 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 EIF3JO75822 258 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 FAM13AO94988 1023 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 SLC18A3Q16572 532 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 LRRC1Q9BTT6 524 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 RANBP17Q9H2T7 1088 aaKnown RBP20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 AIPL1Q9NZN9 384 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 PKD2L1Q9P0L9 805 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 ADAM21Q9UKJ8 722 aa20.15■□□□□ 0.82
SHKBP1-201ENST00000291842 DDX39AO00148 427 aaKnown RBP20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 PALMO75781 387 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 FTCDO95954 541 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 UCHL3P15374 230 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 PON1P27169 355 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 SLC7A5Q01650 507 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 EXOC3L4Q17RC7 722 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 KIAA0753Q2KHM9 967 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 CCDC181Q5TID7 509 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 DPY19L2P1Q6NXN4 242 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 ARHGAP27Q6ZUM4 889 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 SPATA4Q8NEY3 305 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 CHURC1Q8WUH1 139 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 SPAG5Q96R06 1193 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 GMLQ99445 158 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 VCPKMTQ9H867 229 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 PACSIN2Q9UNF0 486 aaPredicted RBP20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 STK24Q9Y6E0 443 aa20.14■□□□□ 0.82
SHKBP1-201ENST00000291842 TARSL2A2RTX5 802 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 TGFB1I1O43294 461 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 VIL1P09327 827 aaKnown RBP20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 PTK2Q05397 1052 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 COG2Q14746 738 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 SPDYE2Q495Y8 402 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 CEP55Q53EZ4 464 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 GJB7Q6PEY0 223 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 C1orf186Q6ZWK4 172 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 ZNF577Q9BSK1 485 aa20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 AJAP1Q9UKB5 411 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 COL2A1P02458 1487 aaPredicted RBP20.14■□□□□ 0.81
SHKBP1-201ENST00000291842 COL4A5P29400 1685 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 UTRNP46939 3433 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 IQCEQ6IPM2 695 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 LDHDQ86WU2 507 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 TTLL6Q8N841 843 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 SLC5A5Q92911 643 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 UNC45AQ9H3U1 944 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 DMGDHQ9UI17 866 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 FAN1Q9Y2M0 1017 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 EPB41P11171 864 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 PRLRP16471 622 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 TCP1P17987 556 aaKnown RBP20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 ZNF571Q7Z3V5 609 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 IRF2BP2Q7Z5L9 587 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 AGBL1Q96MI9 1066 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 SYNPO2Q9UMS6 1093 aa20.13■□□□□ 0.81
SHKBP1-201ENST00000291842 RXRBP28702 533 aa20.12■□□□□ 0.81
SHKBP1-201ENST00000291842 PRELPP51888 382 aa20.12■□□□□ 0.81
SHKBP1-201ENST00000291842 PPP2R5CQ13362 524 aa20.12■□□□□ 0.81
SHKBP1-201ENST00000291842 NAB2Q15742 525 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms