RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 SERINC5Q86VE9 423 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 BICD2Q8TD16 824 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 PPM1EQ8WY54 764 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 GJA10Q969M2 543 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 ZNF274Q96GC6 653 aaPredicted RBP11.11□□□□□ -0.63
CCDC58-201ENST00000291458 PCYT2Q99447 389 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 PRDM12Q9H4Q4 367 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 AZI2Q9H6S1 392 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 CERS4Q9HA82 394 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 GJB4Q9NTQ9 266 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 ERAP1Q9NZ08 941 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 STXBP5LQ9Y2K9 1186 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 RSPH10B2B2RC85 870 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 MAP3K7O43318 606 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 DEXIO95424 95 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 CCNE2O96020 404 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 CA3P07451 260 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 RSPH10BP0C881 870 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 IBSPP21815 317 aaPredicted RBP11.1□□□□□ -0.63
CCDC58-201ENST00000291458 EVCP57679 992 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 WDR5P61964 334 aaKnown RBP11.1□□□□□ -0.63
CCDC58-201ENST00000291458 MBTPS1Q14703 1052 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 GPNMBQ14956 572 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 C6orf132Q5T0Z8 1188 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 CNKSR3Q6P9H4 555 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 CKAP2LQ8IYA6 745 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 MICALL1Q8N3F8 863 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 MAFAQ8NHW3 353 aaPredicted RBP11.1□□□□□ -0.63
CCDC58-201ENST00000291458 PPP1R16BQ96T49 567 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 ZNF577Q9BSK1 485 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 OSBPL7Q9BZF2 842 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 SMARCAD1Q9H4L7 1026 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 TUBE1Q9UJT0 475 aa11.1□□□□□ -0.63
CCDC58-201ENST00000291458 NFASCO94856 1347 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 EMSYQ7Z589 1322 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 LAMA3Q16787 3333 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 IGLV3-22A0A075B6J6 115 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 IPO5O00410 1097 aaKnown RBP11.09□□□□□ -0.63
CCDC58-201ENST00000291458 MEIS1O00470 390 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 CDKL5O76039 1030 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 TDP2O95551 362 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 GHRP10912 638 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 GNAT1P11488 350 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 IGFBP4P22692 258 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 NEK4P51957 841 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 ANAPC15P60006 121 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 SETQ01105 290 aaPredicted RBP11.09□□□□□ -0.63
CCDC58-201ENST00000291458 RBL2Q08999 1139 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 TMEM62Q0P6H9 643 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 PLCB4Q15147 1175 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 TRAF7Q6Q0C0 670 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 SPRED2Q7Z698 418 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 CCDC60Q8IWA6 550 aaPredicted RBP11.09□□□□□ -0.63
CCDC58-201ENST00000291458 MYOCDQ8IZQ8 938 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 BLIDQ8IZY5 108 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 SLC17A8Q8NDX2 589 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 TBCKQ8TEA7 893 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 SLC9A7Q96T83 725 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 ZBED2Q9BTP6 218 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 SLC28A3Q9HAS3 691 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 PCDHA4Q9UN74 947 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 SAMM50Q9Y512 469 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 EVPLQ92817 2033 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 SZT2Q5T011 3432 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 NRCAMQ92823 1304 aa11.09□□□□□ -0.63
CCDC58-201ENST00000291458 TMEM265A0A087WTH1 108 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 TLL1O43897 1013 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 PFKFB2O60825 505 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 LGR5O75473 907 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 ARHGEF15O94989 841 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 CYP3A4P08684 503 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 INSRRP14616 1297 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 HOXC8P31273 242 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 STAT5BP51692 787 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 ME3Q16798 604 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 INF2Q27J81 1249 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 HERC6Q8IVU3 1022 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 DBF4BQ8NFT6 615 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 DNAJB3Q8WWF6 145 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 KCNK17Q96T54 332 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
CCDC58-201ENST00000291458 ZNF302Q9NR11 478 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 SH3GLB2Q9NR46 395 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 ORC3Q9UBD5 711 aaPredicted RBP11.08□□□□□ -0.64
CCDC58-201ENST00000291458 MTUS1Q9ULD2 1270 aa11.08□□□□□ -0.64
CCDC58-201ENST00000291458 CCDC194A0A1B0GVG4 234 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 LCHNA4D1U4 455 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 RFXAPO00287 272 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 MAFGO15525 162 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 JAK2O60674 1132 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 BAIAP3O94812 1187 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 UPP2O95045 317 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 CTDNEP1O95476 244 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 CXCL10P02778 98 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 ANKRD1Q15327 319 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 CCDC85BQ15834 202 aaPredicted RBP11.07□□□□□ -0.64
CCDC58-201ENST00000291458 FAM160B1Q5W0V3 765 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 SWSAP1Q6NVH7 229 aa11.07□□□□□ -0.64
CCDC58-201ENST00000291458 MIS18BP1Q6P0N0 1132 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms