RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 PCDHA2Q9Y5H9 948 aa10.85□□□□□ -0.67
HMHB1-201ENST00000289448 ZBTB42B2RXF5 422 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 ENPP3O14638 875 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 BACH1O14867 736 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 EPB41L2O43491 1005 aaKnown RBP10.84□□□□□ -0.67
HMHB1-201ENST00000289448 LINC00271P0C7V0 271 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 BMP1P13497 986 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 GNA11P29992 359 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 CD52P31358 61 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 CIITAP33076 1130 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 KCNQ1P51787 676 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 PRR16Q569H4 304 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 SWSAP1Q6NVH7 229 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 MTHFD1LQ6UB35 978 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 RTN4RL1Q86UN2 441 aaPredicted RBP10.84□□□□□ -0.67
HMHB1-201ENST00000289448 ADAMTS19Q8TE59 1207 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 CCDC12Q8WUD4 166 aaPredicted RBP10.84□□□□□ -0.67
HMHB1-201ENST00000289448 LINC01599Q8WXQ3 324 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 AIFM3Q96NN9 605 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 NECAB3Q96P71 396 aaPredicted RBP10.84□□□□□ -0.67
HMHB1-201ENST00000289448 YME1L1Q96TA2 773 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 ZNF577Q9BSK1 485 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 TM6SF1Q9BZW5 370 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 CYP46A1Q9Y6A2 500 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 SIP14410 1827 aa10.84□□□□□ -0.67
HMHB1-201ENST00000289448 COL4A4P53420 1690 aaPredicted RBP10.83□□□□□ -0.68
HMHB1-201ENST00000289448 DTNBO60941 627 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 KLRC1P26715 233 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 SLC26A2P50443 739 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 AKAP17AQ02040 695 aaKnown RBP10.83□□□□□ -0.68
HMHB1-201ENST00000289448 STK3Q13188 491 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 NPY5RQ15761 445 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 EPC2Q52LR7 807 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 MCTP2Q6DN12 878 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 MIS18BP1Q6P0N0 1132 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 PDXDC2PQ6P474 469 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 TSHZ1Q6ZSZ6 1077 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 KIAA0319LQ8IZA0 1049 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 CRIPAKQ8N1N5 446 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 ATP8B4Q8TF62 1192 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 GJA10Q969M2 543 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 ZNF274Q96GC6 653 aaPredicted RBP10.83□□□□□ -0.68
HMHB1-201ENST00000289448 CDHR5Q9HBB8 845 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 RC3H2Q9HBD1 1191 aaKnown RBP10.83□□□□□ -0.68
HMHB1-201ENST00000289448 ZNF302Q9NR11 478 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 LMCD1Q9NZU5 365 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 MAFBQ9Y5Q3 323 aaPredicted RBP10.83□□□□□ -0.68
HMHB1-201ENST00000289448 TRPV2Q9Y5S1 764 aa10.83□□□□□ -0.68
HMHB1-201ENST00000289448 SMIM35A0A1B0GVV1 85 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 M0R2N6 131 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 TNFRSF10AO00220 468 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 MSH4O15457 936 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 HBP1O60381 514 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 SETQ01105 290 aaPredicted RBP10.82□□□□□ -0.68
HMHB1-201ENST00000289448 SSRP1Q08945 709 aaKnown RBP10.82□□□□□ -0.68
HMHB1-201ENST00000289448 IER5Q5VY09 327 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 FAM160B1Q5W0V3 765 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 ZNF746Q6NUN9 644 aaPredicted RBP10.82□□□□□ -0.68
HMHB1-201ENST00000289448 CCDC148Q8NFR7 591 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 TMEM40Q8WWA1 233 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 IL17RAQ96F46 866 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 UHRF1Q96T88 793 aaPredicted RBP10.82□□□□□ -0.68
HMHB1-201ENST00000289448 CELF4Q9BZC1 486 aaKnown RBP10.82□□□□□ -0.68
HMHB1-201ENST00000289448 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
HMHB1-201ENST00000289448 TMX1Q9H3N1 280 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 SH3GLB2Q9NR46 395 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 TBC1D22BQ9NU19 505 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 PDRG1Q9NUG6 133 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 PADI3Q9ULW8 664 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 TTC3P53804 2025 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 IGSF9BQ9UPX0 1349 aa10.82□□□□□ -0.68
HMHB1-201ENST00000289448 C5orf42Q9H799 3197 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 H3BNC9 293 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 ZNF862O60290 1169 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 C22orf31O95567 290 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 NLRP5P59047 1200 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 KRT76Q01546 638 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 TMEM266Q2M3C6 531 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 ZNF484Q5JVG2 852 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 TRMT1LQ7Z2T5 733 aaKnown RBP10.81□□□□□ -0.68
HMHB1-201ENST00000289448 TMEM192Q8IY95 271 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 TRIM22Q8IYM9 498 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 NME8Q8N427 588 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 TBCKQ8TEA7 893 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 TNPO1Q92973 898 aaKnown RBP10.81□□□□□ -0.68
HMHB1-201ENST00000289448 HLA-CQ95604 372 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 ZNF689Q96CS4 500 aaPredicted RBP10.81□□□□□ -0.68
HMHB1-201ENST00000289448 GABBR1Q9UBS5 961 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 PCDHA4Q9UN74 947 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 COG5Q9UP83 839 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 PCDHA10Q9Y5I2 948 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 SQORQ9Y6N5 450 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 COL4A6Q14031 1691 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 TCF20Q9UGU0 1960 aaKnown RBP10.81□□□□□ -0.68
HMHB1-201ENST00000289448 KDM3AQ9Y4C1 1321 aa10.81□□□□□ -0.68
HMHB1-201ENST00000289448 COL1A2P08123 1366 aa10.8□□□□□ -0.68
HMHB1-201ENST00000289448 M0QZ92 97 aa10.8□□□□□ -0.68
HMHB1-201ENST00000289448 CPLX1O14810 134 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms