RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 MBLAC1A4D2B0 266 aaPredicted RBP22.34■■□□□ 1.17
TIMP4-201ENST00000287814 POTEMA6NI47 508 aa22.34■■□□□ 1.17
TIMP4-201ENST00000287814 HBP1O60381 514 aa22.34■■□□□ 1.17
TIMP4-201ENST00000287814 TECP42680 631 aa22.34■■□□□ 1.17
TIMP4-201ENST00000287814 EPHB4P54760 987 aa22.34■■□□□ 1.17
TIMP4-201ENST00000287814 PRKCEQ02156 737 aa22.34■■□□□ 1.17
TIMP4-201ENST00000287814 RUFY4Q6ZNE9 571 aa22.34■■□□□ 1.17
TIMP4-201ENST00000287814 SCLYQ96I15 445 aa22.34■■□□□ 1.17
TIMP4-201ENST00000287814 CSF2RAP15509 400 aa22.33■■□□□ 1.17
TIMP4-201ENST00000287814 PKP1Q13835 747 aa22.33■■□□□ 1.17
TIMP4-201ENST00000287814 IL17AQ16552 155 aa22.33■■□□□ 1.17
TIMP4-201ENST00000287814 BBXQ8WY36 941 aaPredicted RBP22.33■■□□□ 1.17
TIMP4-201ENST00000287814 DYDC2Q96IM9 177 aa22.33■■□□□ 1.17
TIMP4-201ENST00000287814 TUBE1Q9UJT0 475 aa22.33■■□□□ 1.17
TIMP4-201ENST00000287814 TMEM150BA6NC51 233 aa22.33■■□□□ 1.16
TIMP4-201ENST00000287814 RRN3P2A6NIE6 340 aa22.33■■□□□ 1.16
TIMP4-201ENST00000287814 OATP04181 439 aa22.33■■□□□ 1.16
TIMP4-201ENST00000287814 CKBP12277 381 aa22.33■■□□□ 1.16
TIMP4-201ENST00000287814 RBL2Q08999 1139 aa22.33■■□□□ 1.16
TIMP4-201ENST00000287814 TRAF7Q6Q0C0 670 aa22.33■■□□□ 1.16
TIMP4-201ENST00000287814 VWCEQ96DN2 955 aa22.33■■□□□ 1.16
TIMP4-201ENST00000287814 EIF2AK1Q9BQI3 630 aaKnown RBP22.33■■□□□ 1.16
TIMP4-201ENST00000287814 COLQQ9Y215 455 aaPredicted RBP22.33■■□□□ 1.16
TIMP4-201ENST00000287814 PITPNM1O00562 1244 aa22.32■■□□□ 1.16
TIMP4-201ENST00000287814 SLITRK3O94933 977 aa22.32■■□□□ 1.16
TIMP4-201ENST00000287814 P4HBP07237 508 aaKnown RBP22.32■■□□□ 1.16
TIMP4-201ENST00000287814 QARSP47897 775 aaKnown RBP22.32■■□□□ 1.16
TIMP4-201ENST00000287814 PSMC5P62195 406 aa22.32■■□□□ 1.16
TIMP4-201ENST00000287814 CYP4A11Q02928 519 aa22.32■■□□□ 1.16
TIMP4-201ENST00000287814 BFSP2Q13515 415 aa22.32■■□□□ 1.16
TIMP4-201ENST00000287814 CTTNQ14247 550 aaKnown RBP22.32■■□□□ 1.16
TIMP4-201ENST00000287814 CAGE1Q8TC20 777 aa22.32■■□□□ 1.16
TIMP4-201ENST00000287814 TNPO1Q92973 898 aaKnown RBP22.32■■□□□ 1.16
TIMP4-201ENST00000287814 HSD17B14Q9BPX1 270 aa22.32■■□□□ 1.16
TIMP4-201ENST00000287814 WDR81Q562E7 1941 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 IQCF3P0C7M6 154 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 KLRC1P26715 233 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 GPNMBQ14956 572 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 ZNF618Q5T7W0 954 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 FOXD4L5Q5VV16 416 aaPredicted RBP22.31■■□□□ 1.16
TIMP4-201ENST00000287814 MTHFD1LQ6UB35 978 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 C16orf59Q7L2K0 433 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 FOXD4L4Q8WXT5 416 aaPredicted RBP22.31■■□□□ 1.16
TIMP4-201ENST00000287814 SH2D3AQ9BRG2 576 aa22.31■■□□□ 1.16
TIMP4-201ENST00000287814 FTOQ9C0B1 505 aaKnown RBP eCLIP22.31■■□□□ 1.16
TIMP4-201ENST00000287814 MYH9P35579 1960 aaKnown RBP22.3■■□□□ 1.16
TIMP4-201ENST00000287814 BMP8BP34820 402 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 THPOP40225 353 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 ATP2C1P98194 919 aaPredicted RBP22.3■■□□□ 1.16
TIMP4-201ENST00000287814 FPGSQ05932 587 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 ZNF484Q5JVG2 852 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 TMEM199Q8N511 208 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 RETREG2Q8NC44 543 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 FAM167AQ96KS9 214 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 LXNQ9BS40 222 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 NRBP2Q9NSY0 501 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 ZBTB39O15060 712 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 FXR2P51116 673 aaKnown RBP eCLIP22.3■■□□□ 1.16
TIMP4-201ENST00000287814 TARBP2Q15633 366 aaKnown RBP22.3■■□□□ 1.16
TIMP4-201ENST00000287814 XKR3Q5GH77 459 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 ANO5Q75V66 913 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 DNAJB3Q8WWF6 145 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 CEP89Q96ST8 783 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 UBE2OQ9C0C9 1292 aaKnown RBP22.3■■□□□ 1.16
TIMP4-201ENST00000287814 PCDHA2Q9Y5H9 948 aa22.3■■□□□ 1.16
TIMP4-201ENST00000287814 KAT6AQ92794 2004 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 COL1A2P08123 1366 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 DDX11L8A8MPP1 907 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 LAD1O00515 517 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 C22orf31O95567 290 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 SPATA31C1P0DKV0 1188 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 ACRP10323 421 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 SELPP16109 830 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 BECN1Q14457 450 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 SF3A1Q15459 793 aaKnown RBP22.29■■□□□ 1.16
TIMP4-201ENST00000287814 LRRC8DQ7L1W4 858 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 TPH2Q8IWU9 490 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 CCDC155Q8N6L0 562 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 NIFKQ9BYG3 293 aaKnown RBP22.29■■□□□ 1.16
TIMP4-201ENST00000287814 OSBPL7Q9BZF2 842 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 ZSCAN16Q9H4T2 348 aaPredicted RBP22.29■■□□□ 1.16
TIMP4-201ENST00000287814 CLIC4Q9Y696 253 aa22.29■■□□□ 1.16
TIMP4-201ENST00000287814 A0A087WWV3 80 aa22.28■■□□□ 1.16
TIMP4-201ENST00000287814 PRPHP41219 470 aa22.28■■□□□ 1.16
TIMP4-201ENST00000287814 MBTPS1Q14703 1052 aa22.28■■□□□ 1.16
TIMP4-201ENST00000287814 TAF2Q6P1X5 1199 aa22.28■■□□□ 1.16
TIMP4-201ENST00000287814 C4orf19Q8IY42 314 aa22.28■■□□□ 1.16
TIMP4-201ENST00000287814 ZNF579Q8NAF0 562 aaKnown RBP22.28■■□□□ 1.16
TIMP4-201ENST00000287814 SEPT9Q9UHD8 586 aaPredicted RBP22.28■■□□□ 1.16
TIMP4-201ENST00000287814 MED24O75448 989 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 ZSCAN22P10073 491 aaPredicted RBP22.27■■□□□ 1.16
TIMP4-201ENST00000287814 NPEPPSP55786 919 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 C9orf50Q5SZB4 431 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 PLA2G4FQ68DD2 849 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 RPAINQ86UA6 219 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 CATSPER3Q86XQ3 398 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 IGSF22Q8N9C0 903 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 FAM49AQ9H0Q0 323 aaPredicted RBP22.27■■□□□ 1.16
TIMP4-201ENST00000287814 ZSWIM4Q9H7M6 989 aa22.27■■□□□ 1.16
TIMP4-201ENST00000287814 LAMA3Q16787 3333 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms