RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 CCDC105Q8IYK2 499 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 MYCT1Q8N699 235 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 USP38Q8NB14 1042 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 MRRFQ96E11 262 aaKnown RBP14.59□□□□□ -0.07
SCAF4-201ENST00000286835 ELAC2Q9BQ52 826 aaKnown RBP14.59□□□□□ -0.07
SCAF4-201ENST00000286835 NT5C3AQ9H0P0 336 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 TAOK3Q9H2K8 898 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 SWAP70Q9UH65 585 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 SSU72P8A0A1W2PR75 194 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 PPP2R2AP63151 447 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 ZKSCAN8Q15776 578 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-201ENST00000286835 TBC1D10BQ4KMP7 808 aaPredicted RBP14.59□□□□□ -0.07
SCAF4-201ENST00000286835 GJB7Q6PEY0 223 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 HOOK3Q86VS8 718 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 ANKS1AQ92625 1134 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 MYH2Q9UKX2 1941 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 MYH15Q9Y2K3 1946 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 NAB2Q15742 525 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 CCDC38Q502W7 563 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 KDM7AQ6ZMT4 941 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 TTYH3Q9C0H2 523 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 ZMYND12Q9H0C1 365 aa14.59□□□□□ -0.07
SCAF4-201ENST00000286835 MTRF1LQ9UGC7 380 aaKnown RBP14.59□□□□□ -0.07
SCAF4-201ENST00000286835 AFPP02771 609 aaKnown RBP14.58□□□□□ -0.08
SCAF4-201ENST00000286835 ITGA4P13612 1032 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 NEDD9Q14511 834 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 FIGNQ5HY92 759 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 LRRC15Q8TF66 581 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 TEKT1Q969V4 418 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 INTS9Q9NV88 658 aaKnown RBP14.58□□□□□ -0.08
SCAF4-201ENST00000286835 DAAM1Q9Y4D1 1078 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 FAM107AO95990 144 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 CCDC197Q8NCU1 140 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 SLC40A1Q9NP59 571 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 EIF4E1BA6NMX2 242 aaKnown RBP14.58□□□□□ -0.08
SCAF4-201ENST00000286835 SPOPO43791 374 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 NEBLO76041 1014 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 PRLRP16471 622 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 TTBK2Q6IQ55 1244 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 HS2ST1Q7LGA3 356 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 SYCE1Q8N0S2 351 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 RAB17Q9H0T7 212 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 PNMA2Q9UL42 364 aa14.58□□□□□ -0.08
SCAF4-201ENST00000286835 CALUO43852 315 aaPredicted RBP14.57□□□□□ -0.08
SCAF4-201ENST00000286835 RASA1P20936 1047 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 ERVK-9P63128 1117 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 PRKG1Q13976 671 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 TPH2Q8IWU9 490 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 CAVIN3Q969G5 261 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 PBKQ96KB5 322 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 NSRP1Q9H0G5 558 aaKnown RBP14.57□□□□□ -0.08
SCAF4-201ENST00000286835 CUL1Q13616 776 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 GLYCTKQ8IVS8 523 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 CCDC63Q8NA47 563 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 HVCN1Q96D96 273 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 BLOC1S4Q9NUP1 217 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 CHORDC1Q9UHD1 332 aaPredicted RBP14.57□□□□□ -0.08
SCAF4-201ENST00000286835 GRID2IPA4D2P6 1211 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 MMEP08473 750 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 NEFHP12036 1026 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 CDK17Q00537 523 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 CNKSR1Q969H4 720 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 ZBTB21Q9ULJ3 1066 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 PCDHA1Q9Y5I3 950 aa14.57□□□□□ -0.08
SCAF4-201ENST00000286835 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 PDHBP11177 359 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 PSMD2Q13200 908 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 LRRC14Q15048 493 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 SFR1Q86XK3 245 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 METTL13Q8N6R0 699 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 ZNF384Q8TF68 577 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 RSRC1Q96IZ7 334 aaKnown RBP14.56□□□□□ -0.08
SCAF4-201ENST00000286835 SEC16BQ96JE7 1060 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 PSMD1Q99460 953 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 TMOD4Q9NZQ9 345 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 NWD2Q9ULI1 1742 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 ZBTB7AO95365 584 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 CALCOCO2Q13137 446 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 MESDQ14696 234 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 BANK1Q8NDB2 785 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.56□□□□□ -0.082e-15■■□□□ 11.9
SCAF4-201ENST00000286835 GRIN2DO15399 1336 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 SHOX2O60902 331 aaPredicted RBP14.56□□□□□ -0.08
SCAF4-201ENST00000286835 RAD17O75943 681 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 PNMA5Q96PV4 448 aa14.56□□□□□ -0.08
SCAF4-201ENST00000286835 A0A1B0GUA9 196 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 DR1Q01658 176 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 KCNMA1Q12791 1236 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 FBXO33Q7Z6M2 555 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 PARP9Q8IXQ6 854 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 BAP1Q92560 729 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 THOC1Q96FV9 657 aaKnown RBP14.55□□□□□ -0.08
SCAF4-201ENST00000286835 SH3GL2Q99962 352 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 BHMT2Q9H2M3 363 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 ASIC3Q9UHC3 531 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 KDM3AQ9Y4C1 1321 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 CAMTA1Q9Y6Y1 1673 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 C21orf2O43822 256 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 DLGAP5Q15398 846 aa14.55□□□□□ -0.08
SCAF4-201ENST00000286835 GRIPAP1Q4V328 841 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms