RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 BLZF1Q9H2G9 400 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 BHMT2Q9H2M3 363 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 ZNF302Q9NR11 478 aa21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 GNEQ9Y223 722 aaKnown RBP21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 MAFBQ9Y5Q3 323 aaPredicted RBP21.1■□□□□ 0.97
PDLIM3-202ENST00000284770 ADCY3O60266 1144 aa21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 SSBP05455 408 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 SARSP49591 514 aaKnown RBP21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 MRE11P49959 708 aa21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 TRPV1Q8NER1 839 aa21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 PXYLP1Q8TE99 480 aa21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 SMARCE1Q969G3 411 aa21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 PCYT2Q99447 389 aa21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 IGSF9BQ9UPX0 1349 aa21.09■□□□□ 0.97
PDLIM3-202ENST00000284770 MYMKA6NI61 221 aa21.08■□□□□ 0.97
PDLIM3-202ENST00000284770 ZNF862O60290 1169 aa21.08■□□□□ 0.97
PDLIM3-202ENST00000284770 ELNP15502 786 aa21.08■□□□□ 0.97
PDLIM3-202ENST00000284770 YWHABP31946 246 aaKnown RBP21.08■□□□□ 0.97
PDLIM3-202ENST00000284770 AFAP1L1Q8TED9 768 aa21.08■□□□□ 0.97
PDLIM3-202ENST00000284770 DBR1Q9UK59 544 aaKnown RBP21.08■□□□□ 0.97
PDLIM3-202ENST00000284770 LGR5O75473 907 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 AKR1A1P14550 325 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 STAT5BP51692 787 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 CACNB2Q08289 660 aaPredicted RBP21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 L1TD1Q5T7N2 865 aaKnown RBP21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 FAM160B1Q5W0V3 765 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 CNNM4Q6P4Q7 775 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 OR6J1Q8NGC5 347 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 AFG1LQ8WV93 481 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 GSDMAQ96QA5 445 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 AZI2Q9H6S1 392 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 Q9Y3F1 56 aa21.08■□□□□ 0.96
PDLIM3-202ENST00000284770 HMGCRP04035 888 aa21.07■□□□□ 0.96
PDLIM3-202ENST00000284770 CYP11B2P19099 503 aa21.07■□□□□ 0.96
PDLIM3-202ENST00000284770 TRIM32Q13049 653 aa21.07■□□□□ 0.96
PDLIM3-202ENST00000284770 BMP2KQ9NSY1 1161 aaPredicted RBP21.07■□□□□ 0.96
PDLIM3-202ENST00000284770 ANKEF1Q9NU02 776 aa21.07■□□□□ 0.96
PDLIM3-202ENST00000284770 EMSYQ7Z589 1322 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 DYNC1LI2O43237 492 aaPredicted RBP21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 PPFIA4O75335 1185 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 STBD1O95210 358 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 DEKP35659 375 aaKnown RBP21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 PRKCEQ02156 737 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 STX1AQ16623 288 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 ANO6Q4KMQ2 910 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 ANO5Q75V66 913 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 OTUD6AQ7L8S5 288 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 PLPPR4Q7Z2D5 763 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 GPBP1Q86WP2 473 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 DDX12PQ92771 950 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 TRIM17Q9Y577 477 aa21.06■□□□□ 0.96
PDLIM3-202ENST00000284770 RPN1P04843 607 aaKnown RBP21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 ATP4AP20648 1035 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 RARRES1P49788 294 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 ARSHQ5FYA8 562 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 XKR3Q5GH77 459 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 TLK2Q86UE8 772 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 RNF214Q8ND24 703 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 ARHGEF35A5YM69 484 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 BIN1O00499 593 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 HOXD8P13378 290 aaPredicted RBP21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 PRKAR2AP13861 404 aaKnown RBP21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 ASIC1P78348 528 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 UTP14CQ5TAP6 766 aaKnown RBP21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 RINT1Q6NUQ1 792 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 DYMQ7RTS9 669 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 TRMT1LQ7Z2T5 733 aaKnown RBP21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 GLG1Q92896 1179 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 SMARCAD1Q9H4L7 1026 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 KCND2Q9NZV8 630 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 MAN1B1Q9UKM7 699 aa21.05■□□□□ 0.96
PDLIM3-202ENST00000284770 CEP350Q5VT06 3117 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 A6NJR5 290 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 SEPT4O43236 478 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 DUSP11O75319 330 aaKnown RBP21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 OATP04181 439 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 SLC26A2P50443 739 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 MAP3K21Q5TCX8 1036 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 C1orf186Q6ZWK4 172 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 TRIML1Q8N9V2 468 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 SLAIN1Q8ND83 568 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 LENG1Q96BZ8 264 aaPredicted RBP21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 DNAJC19Q96DA6 116 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 DNAJC25Q9H1X3 360 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 ANO10Q9NW15 660 aa21.04■□□□□ 0.96
PDLIM3-202ENST00000284770 PVALEFA0A1B0GWK0 134 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 TMEM150BA6NC51 233 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 KLRC4O43908 158 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 MMP3P08254 477 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 CNGA1P29973 690 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 DGKDQ16760 1214 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 XKR9Q5GH70 373 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 TRIM50Q86XT4 487 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 CCDC43Q96MW1 224 aaKnown RBP21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 RUSC1Q9BVN2 902 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 AP5M1Q9H0R1 490 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 NRBP2Q9NSY0 501 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 RMND1Q9NWS8 449 aa21.03■□□□□ 0.96
PDLIM3-202ENST00000284770 CAVIN2O95810 425 aa21.02■□□□□ 0.96
PDLIM3-202ENST00000284770 LGALS2P05162 132 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms