RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CCDC184Q52MB2 194 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SPICE1Q8N0Z3 855 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ARHGEF1Q92888 912 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 FAM227BQ96M60 508 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 FOPNLQ96NB1 174 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PSMB7Q99436 277 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 POLR3CQ9BUI4 534 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 XPO4Q9C0E2 1151 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 OLA1Q9NTK5 396 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 BFARQ9NZS9 450 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SENP1Q9P0U3 644 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SUFUQ9UMX1 484 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 DIS3Q9Y2L1 958 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 K7ERI5 159 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SYF2O95926 243 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SLC4A1P02730 911 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CYBBP04839 570 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 APOA4P06727 396 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 BRAFP15056 766 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ARL4DP49703 201 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 RBM6P78332 1123 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 MXD4Q14582 209 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SNX17Q15036 470 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 MAPK6Q16659 721 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 TTC19Q6DKK2 380 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CXorf38Q8TB03 319 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 KLHDC4Q8TBB5 520 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 TESK2Q96S53 571 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CYP26B1Q9NR63 512 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SUGT1Q9Y2Z0 365 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SLC4A7Q9Y6M7 1214 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 TARBP1Q13395 1621 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PBRM1Q86U86 1689 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 NBPF26B4DH59 902 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 GRIN3BO60391 1043 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ARPP19P56211 112 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PRKCQQ04759 706 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 MED21Q13503 144 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 GRAPQ13588 217 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SLC39A14Q15043 492 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 C7orf31Q8N865 590 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 TTC8Q8TAM2 541 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 GRAPLQ8TC17 118 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SCFD1Q8WVM8 642 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 HEXIM2Q96MH2 286 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CAPS2Q9BXY5 557 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 BSDC1Q9NW68 430 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 MAP3K20Q9NYL2 800 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ABCB11O95342 1321 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SKIP12755 728 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ETF1P62495 437 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PNOCQ13519 176 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ERFEQ4G0M1 354 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 FSCBQ5H9T9 825 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 EFHC2Q5JST6 749 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 APOA5Q6Q788 366 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 MGARPQ8TDB4 240 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SYMPKQ92797 1274 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 P2RX5Q93086 422 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PBKQ96KB5 322 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CNOT6LQ96LI5 555 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PARK7Q99497 189 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 UTP6Q9NYH9 597 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 BAIAP2L1Q9UHR4 511 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ANGPTL2Q9UKU9 493 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 TRIM33Q9UPN9 1127 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ATP7BP35670 1465 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ABCC4O15439 1325 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 APC2O95996 2303 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 RASSF10A6NK89 507 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 DDIT3P35638 169 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 GRIN1Q05586 938 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 MTFR1Q15390 333 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 STXBP2Q15833 593 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 E4F1Q66K89 784 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 OR6B2Q6IFH4 312 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ASNSD1Q9NWL6 643 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PCDHGB4Q9UN71 923 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ZMYM4Q5VZL5 1548 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 FRMPD2Q68DX3 1309 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CCDC188H7C350 402 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PPP1R12AO14974 1030 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CYP2E1P05181 493 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 MX2P20592 715 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ZBED6P86452 979 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 STILQ15468 1287 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SKIV2LQ15477 1246 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 ELF2Q15723 593 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 RWDD4Q6NW29 188 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 TRMT44Q8IYL2 757 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 PROM2Q8N271 834 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 RBM46Q8TBY0 533 aaKnown RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 BRIP1Q9BX63 1249 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 YY1AP1Q9H869 796 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CBX8Q9HC52 389 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 SLC39A2Q9NP94 309 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 VPS9D1Q9Y2B5 631 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 EPN1Q9Y6I3 576 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CARMIL3Q8ND23 1372 aa4.36□□□□□ -1.71
SCN3A-201ENST00000283254 CFAP43Q8NDM7 1665 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms