RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TDRD12Q587J7 1177 aaKnown RBP19.78■□□□□ 0.76
CAPN1-201ENST00000279247 MOB2Q70IA6 237 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 RDH13Q8NBN7 331 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 CCDC42Q96M95 316 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 AS3MTQ9HBK9 375 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 TUFT1Q9NNX1 390 aa19.78■□□□□ 0.76
CAPN1-201ENST00000279247 MACROD2A1Z1Q3 448 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 USO1O60763 962 aaKnown RBP19.77■□□□□ 0.76
CAPN1-201ENST00000279247 KCNMA1Q12791 1236 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 PGM5Q15124 567 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 TEX35Q5T0J7 233 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 C1orf186Q6ZWK4 172 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 NACC1Q96RE7 527 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 ARHGAP25P42331 645 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 EAPPQ56P03 285 aaPredicted RBP19.77■□□□□ 0.76
CAPN1-201ENST00000279247 FAM178BQ8IXR5 827 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 PARVGQ9HBI0 331 aa19.77■□□□□ 0.76
CAPN1-201ENST00000279247 SPDYE4A6NLX3 237 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 ACTN1P12814 892 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 HERVK_113P62684 666 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 EPHA7Q15375 998 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 ANKRD7Q92527 254 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 KLRG1Q96E93 195 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 RCCD1A6NED2 376 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 RRP9O43818 475 aaKnown RBP19.76■□□□□ 0.75
CAPN1-201ENST00000279247 AKAP3O75969 853 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 FECHP22830 423 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 CYP2J2P51589 502 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 KCNH2Q12809 1159 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 UBXN4Q92575 508 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 LACRTQ9GZZ8 138 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 NR3C1P04150 777 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 ANKRD13CQ8N6S4 541 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 PDCD2LQ9BRP1 358 aa19.76■□□□□ 0.75
CAPN1-201ENST00000279247 AGO4Q9HCK5 861 aaKnown RBP19.76■□□□□ 0.75
CAPN1-201ENST00000279247 ARMCX3Q9UH62 379 aaPredicted RBP19.76■□□□□ 0.75
CAPN1-201ENST00000279247 AKR1B10O60218 316 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 HIP1RO75146 1068 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 TUBB4AP04350 444 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 CYLC1P35663 651 aaPredicted RBP19.75■□□□□ 0.75
CAPN1-201ENST00000279247 TMOD4Q9NZQ9 345 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 SBF1O95248 1867 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 EIF4A3P38919 411 aaKnown RBP19.75■□□□□ 0.75
CAPN1-201ENST00000279247 PPP2R3AQ06190 1150 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 TMEM132BQ14DG7 1078 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 UGCGQ16739 394 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 PLA2G4FQ68DD2 849 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 PADI6Q6TGC4 694 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 TRIM59Q8IWR1 403 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 DRC1Q96MC2 740 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 PXMP2Q9NR77 195 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 ARHGAP20Q9P2F6 1191 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 TELO2Q9Y4R8 837 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 STK24Q9Y6E0 443 aa19.75■□□□□ 0.75
CAPN1-201ENST00000279247 ASTN1O14525 1302 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 DHX15O43143 795 aaKnown RBP19.74■□□□□ 0.75
CAPN1-201ENST00000279247 POTEJP0CG39 1038 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 NPEPPSP55786 919 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 RAPGEF1Q13905 1077 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 SYCP3Q8IZU3 236 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 CEP63Q96MT8 703 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 GPRC5CQ9NQ84 441 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 PCNX4Q63HM2 1172 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 JAKMIP2Q96AA8 810 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 RIT2Q99578 217 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 PDCL3Q9H2J4 239 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 JADE2Q9NQC1 790 aa19.74■□□□□ 0.75
CAPN1-201ENST00000279247 TISP43B9A030 160 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 CALUO43852 315 aaPredicted RBP19.73■□□□□ 0.75
CAPN1-201ENST00000279247 SLC9A1P19634 815 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 ZBTB9Q96C00 473 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 HDAC6Q9UBN7 1215 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 CTAGE9A4FU28 777 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 MEA1Q16626 185 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 FBXO38Q6PIJ6 1188 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 UBIAD1Q9Y5Z9 338 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 MRFAP1Q9Y605 127 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 SPA17Q15506 151 aa19.73■□□□□ 0.75
CAPN1-201ENST00000279247 RPTORQ8N122 1335 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 ZNF263O14978 683 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 NR3C2P08235 984 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 XRCC5P13010 732 aaKnown RBP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 MAP3K9P80192 1104 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 TTLL12Q14166 644 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 EPM2AIP1Q7L775 607 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 PCIF1Q9H4Z3 704 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.72■□□□□ 0.751e-7■■■■■ 67.7
CAPN1-201ENST00000279247 TYW1Q9NV66 732 aaKnown RBP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 PLAGL2Q9UPG8 496 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 K7ENM7 598 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 TGFB1I1O43294 461 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 SLC26A4O43511 780 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 P4HBP07237 508 aaKnown RBP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 GFPT1Q06210 699 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 VGLL4Q14135 290 aa19.72■□□□□ 0.75
CAPN1-201ENST00000279247 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 ZNF214Q9UL59 606 aaPredicted RBP19.72■□□□□ 0.75
CAPN1-201ENST00000279247 GNA14O95837 355 aa19.71■□□□□ 0.75
CAPN1-201ENST00000279247 DSG3P32926 999 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms