RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 NT5C2P49902 561 aa12.98□□□□□ -0.33
SLC13A3-201ENST00000279027 XKR9Q5GH70 373 aa12.98□□□□□ -0.33
SLC13A3-201ENST00000279027 TTLL6Q8N841 843 aa12.98□□□□□ -0.33
SLC13A3-201ENST00000279027 FAM212AQ96EL1 285 aa12.98□□□□□ -0.33
SLC13A3-201ENST00000279027 GOLGA6AQ9NYA3 693 aa12.98□□□□□ -0.33
SLC13A3-201ENST00000279027 CEP72Q9P209 647 aa12.98□□□□□ -0.33
SLC13A3-201ENST00000279027 SHANK3Q9BYB0 1731 aa12.98□□□□□ -0.33
SLC13A3-201ENST00000279027 RXRBP28702 533 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 COG2Q14746 738 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 BEND6Q5SZJ8 279 aaPredicted RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 LDHDQ86WU2 507 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 CTNNBL1Q8WYA6 563 aaPredicted RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 SELENOOQ9BVL4 669 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 NFU1Q9UMS0 254 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 FZD1Q9UP38 647 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 TLDC2A0PJX2 215 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 MEIS2O14770 477 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 ZBTB7AO95365 584 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 H2AFZP0C0S5 128 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 ZNF746Q6NUN9 644 aaPredicted RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 H2AFVQ71UI9 128 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 SPATA4Q8NEY3 305 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 DNAJC19Q96DA6 116 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 SH2D4AQ9H788 454 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 CTTNBP2NLQ9P2B4 639 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 LRRIQ3A6PVS8 624 aaPredicted RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 ZNF263O14978 683 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 DLATP10515 647 aaKnown RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 IFFO1Q0D2I5 559 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 TRAPPC11Q7Z392 1133 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 PPM1KQ8N3J5 372 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 SUPT20HQ8NEM7 779 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 UHMK1Q8TAS1 419 aaKnown RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 FAM76AQ8TAV0 307 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 MTMR8Q96EF0 704 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 DMGDHQ9UI17 866 aaKnown RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 SNX12Q9UMY4 172 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 TMEM150BA6NC51 233 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 ZRANB2O95218 330 aaKnown RBP eCLIP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 ARP10275 920 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 UBLCP1Q8WVY7 318 aaPredicted RBP12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 ROBO3Q96MS0 1386 aa12.97□□□□□ -0.33
SLC13A3-201ENST00000279027 KRT5P13647 590 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 GGCXP38435 758 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 JAG1P78504 1218 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 GIT2Q14161 759 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 LXNQ9BS40 222 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 ZNF70Q9UC06 446 aaPredicted RBP12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 PAPPAQ13219 1627 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 IPO5O00410 1097 aaKnown RBP12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 GCLMP48507 274 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 TUBB4BP68371 445 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 TRAF1Q13077 416 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 GLYCTKQ8IVS8 523 aa12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 PDGFDQ9GZP0 370 aaPredicted RBP12.96□□□□□ -0.33
SLC13A3-201ENST00000279027 PSMC2P35998 433 aaKnown RBP12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 PTK2Q05397 1052 aa12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 IFI16Q16666 785 aaKnown RBP12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 LRRC55Q6ZSA7 311 aa12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 TAX1BP1Q86VP1 789 aa12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 NUCKS1Q9H1E3 243 aaKnown RBP12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 RBM12Q9NTZ6 932 aaKnown RBP12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 FAM184BQ9ULE4 1060 aa12.96□□□□□ -0.34
SLC13A3-201ENST00000279027 AKAP3O75969 853 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 PEX3P56589 373 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 TNNC1P63316 161 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 KCNMA1Q12791 1236 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 TMEM119Q4V9L6 283 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 FAM20AQ96MK3 541 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 TSPYL1Q9H0U9 437 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 SIK3Q9Y2K2 1263 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 CACNA1SQ13698 1873 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 NHSL1Q5SYE7 1610 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 ZSCAN5CA6NGD5 496 aaPredicted RBP12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 KRIT1O00522 736 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 RGL2O15211 777 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 UCHL3P15374 230 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 RPA1P27694 616 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 ORC2Q13416 577 aaPredicted RBP12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 NBPF9Q3BBW0 867 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 CEP55Q53EZ4 464 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 CCDC25Q86WR0 208 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 CEP63Q96MT8 703 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 NACC1Q96RE7 527 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 UBE2TQ9NPD8 197 aaPredicted RBP12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 DNAJC12Q9UKB3 198 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 TUBBP07437 444 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 IFT20Q8IY31 132 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 PRDM4Q9UKN5 801 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 CHD4Q14839 1912 aa12.95□□□□□ -0.34
SLC13A3-201ENST00000279027 ZBTB22O15209 634 aa12.94□□□□□ -0.34
SLC13A3-201ENST00000279027 ATP8B1O43520 1251 aa12.94□□□□□ -0.34
SLC13A3-201ENST00000279027 ATP2C2O75185 946 aa12.94□□□□□ -0.34
SLC13A3-201ENST00000279027 ZNF211Q13398 564 aaPredicted RBP12.94□□□□□ -0.34
SLC13A3-201ENST00000279027 TCHPQ9BT92 498 aa12.94□□□□□ -0.34
SLC13A3-201ENST00000279027 METTL14Q9HCE5 456 aaKnown RBP12.94□□□□□ -0.34
SLC13A3-201ENST00000279027 ANKRD36CQ5JPF3 1778 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms