RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 MAPK7Q13164 816 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 GPR142Q7Z601 462 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 GPIHBP1Q8IV16 184 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 DNERQ8NFT8 737 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 TRIM47Q96LD4 638 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 PCYT2Q99447 389 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 TBC1D22BQ9NU19 505 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 SLC9A2Q9UBY0 812 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 RWDD2AQ9UIY3 292 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
SSRP1-201ENST00000278412 MYH9P35579 1960 aaKnown RBP13.01□□□□□ -0.33
SSRP1-201ENST00000278412 PLXNA1Q9UIW2 1896 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 C11orf97A0A1B0GVM6 126 aaPredicted RBP13□□□□□ -0.33
SSRP1-201ENST00000278412 ADCY6O43306 1168 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 AOC2O75106 756 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 STBD1O95210 358 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 SLC25A27O95847 323 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 P4HBP07237 508 aaKnown RBP13□□□□□ -0.33
SSRP1-201ENST00000278412 QARSP47897 775 aaKnown RBP13□□□□□ -0.33
SSRP1-201ENST00000278412 RARRES1P49788 294 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 KRT31Q15323 416 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 PADI6Q6TGC4 694 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 NPLOC4Q8TAT6 608 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 PNMA2Q9UL42 364 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 PYCARDQ9ULZ3 195 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 SYNGAP1Q96PV0 1343 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 FARP2O94887 1054 aaPredicted RBP13□□□□□ -0.33
SSRP1-201ENST00000278412 GGPS1O95749 300 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 MARK3P27448 753 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 TAF1CQ15572 869 aaPredicted RBP13□□□□□ -0.33
SSRP1-201ENST00000278412 ARMCX2Q7L311 632 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 CACTINQ8WUQ7 758 aaKnown RBP13□□□□□ -0.33
SSRP1-201ENST00000278412 P2RX5Q93086 422 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 FIZ1Q96SL8 496 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 ARHGAP39Q9C0H5 1083 aa13□□□□□ -0.33
SSRP1-201ENST00000278412 LAMA2P24043 3122 aaKnown RBP13□□□□□ -0.33
SSRP1-201ENST00000278412 PVALEFA0A1B0GWK0 134 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 WDR64B1ANS9 1081 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 HIP1RO75146 1068 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 TPD52L1Q16890 204 aaPredicted RBP12.99□□□□□ -0.33
SSRP1-201ENST00000278412 TCEAL9Q9UHQ7 104 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 GSTTP1A0A1W2PQM5 241 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 MYL1P05976 194 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 KLK7P49862 253 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 PDE4CQ08493 712 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 CCL14Q16627 93 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 CNNM4Q6P4Q7 775 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 ABHD15Q6UXT9 468 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 CSGALNACT2Q8N6G5 542 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 SAMD3Q8N6K7 520 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 CCDC155Q8N6L0 562 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 NACC1Q96RE7 527 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 IWS1Q96ST2 819 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 ZSWIM4Q9H7M6 989 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 FLRT1Q9NZU1 646 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 PCDHA10Q9Y5I2 948 aa12.99□□□□□ -0.33
SSRP1-201ENST00000278412 ARHGEF35A5YM69 484 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 KCNJ18B7U540 433 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 PSMA7O14818 248 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 CRHR2Q13324 411 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 KCNJ12Q14500 433 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 XKR9Q5GH70 373 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 TEX2Q8IWB9 1127 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 MYCT1Q8N699 235 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 MRFAP1L1Q96HT8 127 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 MROH8Q9H579 483 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 RNF225M0QZC1 329 aaPredicted RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 SLC10A3P09131 477 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 ADCYAP1R1P41586 468 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 PRKCEQ02156 737 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 ZNF792Q3KQV3 632 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 GNPTABQ3T906 1256 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 IFNL1Q8IU54 200 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 BSNDQ8WZ55 320 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 PARK7Q99497 189 aaKnown RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 MRPL44Q9H9J2 332 aaKnown RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 ADD3Q9UEY8 706 aaKnown RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 GCNT3O95395 438 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 SNAI1O95863 264 aaPredicted RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 CCNE1P24864 410 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 KRT76Q01546 638 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 CENPPQ6IPU0 288 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 ARMCX5Q6P1M9 558 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 CCDC65Q8IXS2 484 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 ZSWIM2Q8NEG5 633 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 MORF4L1Q9UBU8 362 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 SEPT9Q9UHD8 586 aaPredicted RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 DDX41Q9UJV9 622 aaKnown RBP12.98□□□□□ -0.33
SSRP1-201ENST00000278412 TLL2Q9Y6L7 1015 aa12.98□□□□□ -0.33
SSRP1-201ENST00000278412 ADGRA2Q96PE1 1338 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 CLIC2O15247 247 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 PSMC5P62195 406 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 DRP2Q13474 957 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 TCP11X2Q5H9J9 407 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 MYOCDQ8IZQ8 938 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 TRAPPC12Q8WVT3 735 aa12.97□□□□□ -0.33
SSRP1-201ENST00000278412 PES1O00541 588 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms