RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 DAAM1Q9Y4D1 1078 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 PIK3C2BO00750 1634 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 CNTNAP4Q9C0A0 1308 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 MED7O43513 233 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 SH3BP5O60239 455 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 PPFIA4O75335 1185 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 NR3C1P04150 777 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 ATP2C1P98194 919 aaPredicted RBP12.21□□□□□ -0.46
USP6NL-201ENST00000277575 GABPB1Q06547 395 aaPredicted RBP12.21□□□□□ -0.46
USP6NL-201ENST00000277575 NEDD9Q14511 834 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 SARM1Q6SZW1 724 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 SDCCAG8Q86SQ7 713 aaPredicted RBP12.21□□□□□ -0.46
USP6NL-201ENST00000277575 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.46
USP6NL-201ENST00000277575 ZBTB12Q9Y330 459 aaPredicted RBP12.21□□□□□ -0.46
USP6NL-201ENST00000277575 MYCP01106 439 aaPredicted RBP12.2□□□□□ -0.46
USP6NL-201ENST00000277575 OATP04181 439 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 GBP1P32455 592 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 C10orf76Q5T2E6 689 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 STMN2Q93045 179 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 ACAD9Q9H845 621 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 MAD1L1Q9Y6D9 718 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 LGALS16A8MUM7 142 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 RNF40O75150 1001 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 MOCS3O95396 460 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 SFNP31947 248 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 HMGCS2P54868 508 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF543Q08ER8 600 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 COASYQ13057 564 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 SHC4Q6S5L8 630 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 SCARA5Q6ZMJ2 495 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 CLEC10AQ8IUN9 316 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 PFDN4Q9NQP4 134 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 LRFN2Q9ULH4 789 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 AFG3L2Q9Y4W6 797 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF131P52739 623 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 RFX6Q8HWS3 928 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 PSPC1Q8WXF1 523 aaKnown RBP12.2□□□□□ -0.46
USP6NL-201ENST00000277575 RNF14Q9UBS8 474 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 CNOT7Q9UIV1 285 aaKnown RBP12.2□□□□□ -0.46
USP6NL-201ENST00000277575 PCDHA13Q9Y5I0 950 aa12.2□□□□□ -0.46
USP6NL-201ENST00000277575 SLC16A4O15374 487 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 HEXIM1O94992 359 aaKnown RBP12.19□□□□□ -0.46
USP6NL-201ENST00000277575 NDUFB10O96000 172 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 OR6B2Q6IFH4 312 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 KIAA1841Q6NSI8 718 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 HHIPL2Q6UWX4 724 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 MICALL2Q8IY33 904 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 PPFIBP2Q8ND30 876 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 SPON1Q9HCB6 807 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 GABBR1Q9UBS5 961 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 TECPR2O15040 1411 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 INPP5BP32019 993 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 CEP55Q53EZ4 464 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 SWSAP1Q6NVH7 229 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 CDC42EP5Q6NZY7 148 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 PHLPP2Q6ZVD8 1323 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 ENTPD3O75355 529 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 CIB2O75838 187 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 ATP1A2P50993 1020 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 ARID5BQ14865 1188 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 ZNF667Q5HYK9 610 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 PHLDB2Q86SQ0 1253 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 RUNDC3BQ96NL0 473 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 DNAJC12Q9UKB3 198 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 ARHGEF37A1IGU5 675 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 SGK1O00141 431 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 GCLMP48507 274 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 KNOP1Q1ED39 458 aaKnown RBP12.19□□□□□ -0.46
USP6NL-201ENST00000277575 CCDC13Q8IYE1 715 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 GUF1Q8N442 669 aaKnown RBP12.19□□□□□ -0.46
USP6NL-201ENST00000277575 KIAA1586Q9HCI6 787 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 EPB41L5Q9HCM4 733 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 PXDNLA1KZ92 1463 aa12.19□□□□□ -0.46
USP6NL-201ENST00000277575 DENND3A2RUS2 1198 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 ZMYND10O75800 440 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 PRR29P0C7W0 189 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 YWHAGP61981 247 aaKnown RBP eCLIP12.18□□□□□ -0.46
USP6NL-201ENST00000277575 EP400NLQ6ZTU2 488 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 MCUR1Q96AQ8 359 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-201ENST00000277575 SLC38A10Q9HBR0 1119 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 EPB41L4AQ9HCS5 686 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-201ENST00000277575 SEL1LQ9UBV2 794 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 NRXN1Q9ULB1 1477 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 KIDINS220Q9ULH0 1771 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 HSPA6P17066 643 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 PSMC5P62195 406 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 KCNH2Q12809 1159 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 GKAP1Q5VSY0 366 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-201ENST00000277575 HEXIM2Q96MH2 286 aaKnown RBP12.18□□□□□ -0.46
USP6NL-201ENST00000277575 LXNQ9BS40 222 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.18□□□□□ -0.46
USP6NL-201ENST00000277575 FRMPD1Q5SYB0 1578 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 LRRD1A4D1F6 860 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 SNX1Q13596 522 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 TTLL4Q14679 1199 aa12.18□□□□□ -0.46
USP6NL-201ENST00000277575 R3HDM1Q15032 1099 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms