RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 UNCXA6NJT0 531 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 LRRC53A6NM62 1247 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 RNF40O75150 1001 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 TNFRSF8P28908 595 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 SREBF2Q12772 1141 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 SLC9C1Q4G0N8 1177 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 RRAGAQ7L523 313 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 DYMQ7RTS9 669 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 CACNA2D4Q7Z3S7 1137 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 SPATA4Q8NEY3 305 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 AENQ8WTP8 325 aaKnown RBP14.22□□□□□ -0.13
C9orf3-201ENST00000277198 COA7Q96BR5 231 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 DNAJC19Q96DA6 116 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 MTMR8Q96EF0 704 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 NOX5Q96PH1 765 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 OSBPL9Q96SU4 736 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 JMJD4Q9H9V9 463 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 DDX25Q9UHL0 483 aaKnown RBP14.22□□□□□ -0.13
C9orf3-201ENST00000277198 CDK5RAP2Q96SN8 1893 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 CENPFP49454 3210 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 SIPA1L1O43166 1804 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-201ENST00000277198 POTEMA6NI47 508 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 EPHB6O15197 1021 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 ZNF185O15231 689 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 PLEKP08567 350 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-201ENST00000277198 PAFAH1B1P43034 410 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 TNNT3P45378 269 aaPredicted RBP14.22□□□□□ -0.13
C9orf3-201ENST00000277198 MCTP2Q6DN12 878 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 AFAP1L1Q8TED9 768 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 SELENOOQ9BVL4 669 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 DNAJC18Q9H819 358 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 FAM204AQ9H8W3 233 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 CAPN6Q9Y6Q1 641 aa14.22□□□□□ -0.13
C9orf3-201ENST00000277198 CCL15-CCL14A0A0B4J2E2 113 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 ZBTB5O15062 677 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 NPM3O75607 178 aaKnown RBP14.21□□□□□ -0.13
C9orf3-201ENST00000277198 CAPN15O75808 1086 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 SERPING1P05155 500 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 MAP3K10Q02779 954 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 COASYQ13057 564 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 CCL15Q16663 113 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 FAM26FQ5R3K3 315 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 EMBQ6PCB8 327 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 MOXD1Q6UVY6 613 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 ERO1BQ86YB8 467 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 CCDC65Q8IXS2 484 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 ZC3H3Q8IXZ2 948 aaKnown RBP14.21□□□□□ -0.13
C9orf3-201ENST00000277198 HAS1Q92839 578 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 HOOK2Q96ED9 719 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 SERPINB13Q9UIV8 391 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 PCDHA12Q9UN75 941 aa14.21□□□□□ -0.13
C9orf3-201ENST00000277198 FRMPD2Q68DX3 1309 aaPredicted RBP14.21□□□□□ -0.14
C9orf3-201ENST00000277198 NKRFO15226 690 aaKnown RBP eCLIP14.2□□□□□ -0.14
C9orf3-201ENST00000277198 USP11P51784 963 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 JAG1P78504 1218 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 HGSNATQ68CP4 663 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 ADGRF4Q8IZF3 695 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.2□□□□□ -0.14
C9orf3-201ENST00000277198 PANK4Q9NVE7 773 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 STK24Q9Y6E0 443 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 TESPA1A2RU30 521 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-201ENST00000277198 KCNMA1Q12791 1236 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 EDRF1Q3B7T1 1238 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 NOL9Q5SY16 702 aaKnown RBP14.2□□□□□ -0.14
C9orf3-201ENST00000277198 CCDC181Q5TID7 509 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 SFMBT2Q5VUG0 894 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 REM2Q8IYK8 340 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-201ENST00000277198 ZNF296Q8WUU4 475 aaPredicted RBP14.2□□□□□ -0.14
C9orf3-201ENST00000277198 CCDC17Q96LX7 622 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 NUDT12Q9BQG2 462 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 PSTPIP2Q9H939 334 aa14.2□□□□□ -0.14
C9orf3-201ENST00000277198 CYP3A7-CYP3A51PA0A087WV96 503 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 GOLGA6BA6NDN3 693 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 A6NNZ2 444 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 MARCH6O60337 910 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 MOCS3O95396 460 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 AKR1B1P15121 316 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 CYP3A7P24462 503 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 EPHB4P54760 987 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 IRX5P78411 483 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-201ENST00000277198 CAP1Q01518 475 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 C2orf54Q08AI8 447 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 CRHR2Q13324 411 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 NNTQ13423 1086 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 TUBB8Q3ZCM7 444 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 CFAP221Q4G0U5 840 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 CCDC40Q4G0X9 1142 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 KCNK18Q7Z418 384 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 TRIM59Q8IWR1 403 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 LRRC47Q8N1G4 583 aaKnown RBP14.19□□□□□ -0.14
C9orf3-201ENST00000277198 TANGO6Q9C0B7 1094 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 MLXIPQ9HAP2 919 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 PCDHA2Q9Y5H9 948 aa14.19□□□□□ -0.14
C9orf3-201ENST00000277198 COL2A1P02458 1487 aaPredicted RBP14.19□□□□□ -0.14
C9orf3-201ENST00000277198 FRMD3A2A2Y4 597 aa14.18□□□□□ -0.14
C9orf3-201ENST00000277198 GRID2IPA4D2P6 1211 aa14.18□□□□□ -0.14
C9orf3-201ENST00000277198 PTPRAP18433 802 aa14.18□□□□□ -0.14
C9orf3-201ENST00000277198 PPIL2Q13356 520 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms