RNA–Protein interactions for RNA: ENST00000274695.8

CDKAL1-201, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKAL1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-201ENST00000274695 ARSDP51689 593 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 ZNF280AP59817 542 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 PTPN11Q06124 597 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 CLN3Q13286 438 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 SAFBQ15424 915 aaKnown RBP eCLIP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 SPRED3Q2MJR0 410 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 VHLLQ6RSH7 139 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 TMCO3Q6UWJ1 677 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 DPF2Q92785 391 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 ERP27Q96DN0 273 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 GPR101Q96P66 508 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 SLC6A16Q9GZN6 736 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 BOLA2Q9H3K6 86 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 MED4Q9NPJ6 270 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 PF4V1P10720 104 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 CDK17Q00537 523 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 PPP2R5BQ15173 497 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 SPECC1LQ69YQ0 1117 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 ZNF771Q7L3S4 317 aaPredicted RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 RPAINQ86UA6 219 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 SPATS2Q86XZ4 545 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 C19orf47Q8N9M1 422 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 CCDC191Q8NCU4 936 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 IGDCC4Q8TDY8 1250 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 KLHL6Q8WZ60 621 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 EIF2AK1Q9BQI3 630 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 DBNDD2Q9BQY9 259 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 GSX2Q9BZM3 304 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 TRIM39Q9HCM9 518 aa6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 LIMA1Q9UHB6 759 aaKnown RBP6.86□□□□□ -1.31
CDKAL1-201ENST00000274695 H3BQV1 296 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 FZD9O00144 591 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 PSMD14O00487 310 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 XYLBO75191 536 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 ACTN2P35609 894 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 UBE3CQ15386 1083 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 WHAMMP3Q1A5X7 153 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 IFFO2Q5TF58 517 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 CXorf57Q6NSI4 855 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 C1orf228Q6PIY5 440 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 BTLAQ7Z6A9 289 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 STK11IPQ8N1F8 1099 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 CEP112Q8N8E3 955 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 GOLGA1Q92805 767 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 TNFRSF25Q93038 417 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 SMARCE1Q969G3 411 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 GJA10Q969M2 543 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 DCAF5Q96JK2 942 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 SH3GL2Q99962 352 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 A1CFQ9NQ94 594 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 PRDM11Q9NQV5 511 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 ADD3Q9UEY8 706 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 TNPO3Q9Y5L0 923 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 COL5A2P05997 1499 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 LRRC37AA6NMS7 1700 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 NAV1Q8NEY1 1877 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 DOT1LQ8TEK3 1739 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 H3BQF6 201 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 EYA2O00167 538 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 S1PR4O95977 384 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 IVLP07476 585 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 SNRPA1P09661 255 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 EPB41P11171 864 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 ARHGAP25P42331 645 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 CDK8P49336 464 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 PLCD1P51178 756 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 GTF2A2P52657 109 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 TEFQ10587 303 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 SMC1AQ14683 1233 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 TEX35Q5T0J7 233 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 C16orf54Q6UWD8 224 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 CXorf38Q8TB03 319 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 SLC7A14Q8TBB6 771 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 FAM71BQ8TC56 605 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 ZNF516Q92618 1163 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 MPP4Q96JB8 637 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 ZKSCAN3Q9BRR0 538 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 SELENOOQ9BVL4 669 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 PUS7LQ9H0K6 701 aaKnown RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 EHMT1Q9H9B1 1298 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 AATFQ9NY61 560 aaKnown RBP eCLIP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 ZFATQ9P243 1243 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 CDC23Q9UJX2 597 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 GGA2Q9UJY4 613 aa6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 ZNF646O15015 1829 aaPredicted RBP6.85□□□□□ -1.31
CDKAL1-201ENST00000274695 PNPLA7Q6ZV29 1317 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 A0A1W2PQU0 124 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 BECN2A8MW95 431 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 LCA5LO95447 670 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 IFNAR1P17181 557 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 TNFAIP3P21580 790 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 GUCY2CP25092 1073 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 GRIA2P42262 883 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 TRIM14Q14142 442 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 MEA1Q16626 185 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 PAPD7Q5XG87 772 aaKnown RBP6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 MPRIPQ6WCQ1 1025 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 ARHGAP27Q6ZUM4 889 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 TMC6Q7Z403 805 aa6.84□□□□□ -1.31
CDKAL1-201ENST00000274695 CCDC89Q8N998 374 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms