RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ACTR5Q9H9F9 607 aaPredicted RBP14.08□□□□□ -0.16
COL8A1-202ENST00000273342 RIC8AQ9NPQ8 531 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
COL8A1-202ENST00000273342 EMILIN3Q9NT22 766 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 STK17AQ9UEE5 414 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 TMEM59LQ9UK28 342 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 CACNA1SQ13698 1873 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 ZNF142P52746 1687 aaPredicted RBP14.08□□□□□ -0.16
COL8A1-202ENST00000273342 BCL9O00512 1426 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 CLIC2O15247 247 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 EDIL3O43854 480 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 GFPT2O94808 682 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 MMEP08473 750 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 UCHL3P15374 230 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 SLC16A2P36021 539 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 MYO1EQ12965 1108 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 LRRC14Q15048 493 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 RPAINQ86UA6 219 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 KSR1Q8IVT5 923 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 TRIM59Q8IWR1 403 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 STAMBPL1Q96FJ0 436 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 PAGR1Q9BTK6 254 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 HDAC9Q9UKV0 1011 aa14.08□□□□□ -0.16
COL8A1-202ENST00000273342 UTP11Q9Y3A2 253 aaKnown RBP14.08□□□□□ -0.16
COL8A1-202ENST00000273342 FOXO6A8MYZ6 492 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 F8VZ95 297 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 LDHBP07195 334 aaKnown RBP14.07□□□□□ -0.16
COL8A1-202ENST00000273342 MYBP10242 640 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 KRT13P13646 458 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 RPS8P62241 208 aaKnown RBP14.07□□□□□ -0.16
COL8A1-202ENST00000273342 LRIG3Q6UXM1 1119 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 IRF2BP2Q7Z5L9 587 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 TPCN2Q8NHX9 752 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 SCFD1Q8WVM8 642 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 MIEF2Q96C03 454 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 CHMP6Q96FZ7 201 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 TOGARAM1Q9Y4F4 1720 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 PLCH1Q4KWH8 1693 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 DRD4P21917 467 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 BIRC3Q13489 604 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 ZCWPW2Q504Y3 356 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 EMC10Q5UCC4 262 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 CCT6BQ92526 530 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 XPO6Q96QU8 1125 aaKnown RBP14.07□□□□□ -0.16
COL8A1-202ENST00000273342 PRMT1Q99873 361 aaKnown RBP14.07□□□□□ -0.16
COL8A1-202ENST00000273342 TACO1Q9BSH4 297 aaKnown RBP14.07□□□□□ -0.16
COL8A1-202ENST00000273342 RAB34Q9BZG1 259 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 GANQ9H2C0 597 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 AZI2Q9H6S1 392 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL8A1-202ENST00000273342 PCDHA12Q9UN75 941 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 TRIM37O94972 964 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 ADCY1Q08828 1119 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 OTUD6AQ7L8S5 288 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 LRRC34Q8IZ02 419 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 FMO2Q99518 471 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 NOD2Q9HC29 1040 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 A1CFQ9NQ94 594 aaKnown RBP14.07□□□□□ -0.16
COL8A1-202ENST00000273342 TMOD4Q9NZQ9 345 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 ANKIB1Q9P2G1 1089 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
COL8A1-202ENST00000273342 SFI1A8K8P3 1242 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 TMEM110-MUSTN1A8MSY1 372 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 CDK8P49336 464 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 CASP4P49662 377 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 ADCY7P51828 1080 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 ELF3P78545 371 aaPredicted RBP14.06□□□□□ -0.16
COL8A1-202ENST00000273342 CCDC25Q86WR0 208 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 LRRC57Q8N9N7 239 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 CCDC197Q8NCU1 140 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 NUCKS1Q9H1E3 243 aaKnown RBP14.06□□□□□ -0.16
COL8A1-202ENST00000273342 ERVK-5Q9HDB9 667 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 DDX25Q9UHL0 483 aaKnown RBP14.06□□□□□ -0.16
COL8A1-202ENST00000273342 POTEFA5A3E0 1075 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 CETN3O15182 167 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 POTEIP0CG38 1075 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 SLURP2P0DP57 97 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 PLCB4Q15147 1175 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 EXOC3L4Q17RC7 722 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 POTEGQ6S5H5 508 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 POTEEQ6S8J3 1075 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 GLYCTKQ8IVS8 523 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 KIF2BQ8N4N8 673 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 CCDC26Q8TAB7 109 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 PBKQ96KB5 322 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 AIPL1Q9NZN9 384 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 PPP1R9AQ9ULJ8 1098 aa14.06□□□□□ -0.16
COL8A1-202ENST00000273342 H2AFZP0C0S5 128 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 KCNA1Q09470 495 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 H2AFVQ71UI9 128 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 EDEM3Q9BZQ6 932 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 DBR1Q9UK59 544 aaKnown RBP14.05□□□□□ -0.16
COL8A1-202ENST00000273342 STK38LQ9Y2H1 464 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
COL8A1-202ENST00000273342 ATP6V1G2O95670 118 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 PLA2G4BP0C869 781 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 FGFR4P22455 802 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 PABPC4Q13310 644 aaKnown RBP eCLIP14.05□□□□□ -0.16
COL8A1-202ENST00000273342 SLC29A2Q14542 456 aa14.05□□□□□ -0.16
COL8A1-202ENST00000273342 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms