RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 SLC10A5Q5PT55 438 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 CCNYQ8ND76 341 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 MCUQ8NE86 351 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 GSDMAQ96QA5 445 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 SRPK1Q96SB4 655 aaKnown RBP14.19□□□□□ -0.14
PRDM16-201ENST00000270722 TSSK1BQ9BXA7 367 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 SAT1P21673 171 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 CDC42EP1Q00587 391 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 MYL7Q01449 175 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 ADAM9Q13443 819 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 KRT40Q6A162 431 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 ARHGAP26Q9UNA1 814 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 KAZNQ674X7 775 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 PPP4R3CPQ6ZMV5 832 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 CNBD2Q96M20 576 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 GTPBP6O43824 516 aaPredicted RBP14.19□□□□□ -0.14
PRDM16-201ENST00000270722 RNASE9P60153 205 aaKnown RBP14.19□□□□□ -0.14
PRDM16-201ENST00000270722 DNAJC24Q6P3W2 148 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 YAF2Q8IY57 180 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 NR1H4Q96RI1 486 aaPredicted RBP14.19□□□□□ -0.14
PRDM16-201ENST00000270722 CCDC78A2IDD5 438 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 GOLGA8TH3BQL2 631 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 SGK1O00141 431 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 KCNK3O14649 394 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 SLC27A2O14975 620 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 GOLGA8HP0CJ92 632 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 ABCB4P21439 1286 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 RXRBP28702 533 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 NELFCDQ8IXH7 590 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 TERB1Q8NA31 727 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 C19orf60Q96EN9 201 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 SSH2Q76I76 1423 aa14.19□□□□□ -0.14
PRDM16-201ENST00000270722 KCNJ18B7U540 433 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 KCNJ12Q14500 433 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 CABLES1Q8TDN4 633 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 TEKT4Q8WW24 435 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 PLXNC1O60486 1568 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 MED23Q9ULK4 1368 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 IFT88Q13099 833 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 TEDDM1Q5T9Z0 273 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 NANOGNBQ7Z5D8 188 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 RPF1Q9H9Y2 349 aaKnown RBP14.18□□□□□ -0.14
PRDM16-201ENST00000270722 SNUPNO95149 360 aaKnown RBP14.18□□□□□ -0.14
PRDM16-201ENST00000270722 KMT5AQ9NQR1 393 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 STRIP2Q9ULQ0 834 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 CCT5P48643 541 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 SCRN3Q0VDG4 424 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 TRPC7Q9HCX4 862 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 ZNF263O14978 683 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 RASSF7Q02833 373 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 CEP78Q5JTW2 689 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 ZNF577Q9BSK1 485 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 ASNSP08243 561 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 ATP5JP18859 108 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 CCDC127Q96BQ5 260 aa14.18□□□□□ -0.14
PRDM16-201ENST00000270722 RPAP3Q9H6T3 665 aaPredicted RBP14.18□□□□□ -0.14
PRDM16-201ENST00000270722 SGSM2O43147 1006 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 EEF1GP26641 437 aaKnown RBP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 LUZP2Q86TE4 346 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 RFX6Q8HWS3 928 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 OLFM1Q99784 485 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 HGSO14964 777 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 FDX1P10109 184 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 PDIK1LQ8N165 341 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 MSH2P43246 934 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 SLFNL1Q499Z3 407 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 MAPK8IP1Q9UQF2 711 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 POLA2Q14181 598 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 TOGARAM2Q6ZUX3 1019 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 CFAP73A6NFT4 308 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 JAK3P52333 1124 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 DAB2P98082 770 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 RDH13Q8NBN7 331 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 ATP6V1HQ9UI12 483 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 GTPBP10A4D1E9 387 aaKnown RBP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 UBXN8O00124 270 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 TPP2P29144 1249 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 TIMM10P62072 90 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 SNX1Q13596 522 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 MFSD14CQ5VZR4 134 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 KIAA0825Q8IV33 1275 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 MLPHQ9BV36 600 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 POLKQ9UBT6 870 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 AP3B1O00203 1094 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 TRAPPC3O43617 180 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 PPP6R3Q5H9R7 873 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 TMC5Q6UXY8 1006 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 EYA1Q99502 592 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 TMEM106CQ9BVX2 250 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 OSBPL1AQ9BXW6 950 aa14.17□□□□□ -0.14
PRDM16-201ENST00000270722 FNDC3AQ9Y2H6 1198 aaKnown RBP14.17□□□□□ -0.14
PRDM16-201ENST00000270722 ART3Q13508 389 aa14.16□□□□□ -0.14
PRDM16-201ENST00000270722 CC2D1AQ6P1N0 951 aaPredicted RBP14.16□□□□□ -0.14
PRDM16-201ENST00000270722 ARHGEF25Q86VW2 580 aa14.16□□□□□ -0.14
PRDM16-201ENST00000270722 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
PRDM16-201ENST00000270722 OCRLQ01968 901 aa14.16□□□□□ -0.14
PRDM16-201ENST00000270722 SLC4A1P02730 911 aa14.16□□□□□ -0.14
PRDM16-201ENST00000270722 ZBTB38Q8NAP3 1195 aaPredicted RBP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms