RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 MYCLP12524 364 aaPredicted RBP17.05■□□□□ 0.32
COPS3-201ENST00000268717 SFNP31947 248 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 JAK3P52333 1124 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 CYP4A11Q02928 519 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 NR1I3Q14994 352 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 FILIP1LQ4L180 1135 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 MIER3Q7Z3K6 550 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 NAP1L5Q96NT1 182 aaPredicted RBP17.05■□□□□ 0.32
COPS3-201ENST00000268717 PURBQ96QR8 312 aaKnown RBP17.05■□□□□ 0.32
COPS3-201ENST00000268717 SENP7Q9BQF6 1050 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 INTS13Q9NVM9 706 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 RGL1Q9NZL6 768 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
COPS3-201ENST00000268717 TCEAL9Q9UHQ7 104 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 NFASCO94856 1347 aa17.05■□□□□ 0.32
COPS3-201ENST00000268717 CHMP2AO43633 222 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 GRK4P32298 578 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 PSMC6P62333 389 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 IRF5Q13568 498 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 GNPTABQ3T906 1256 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 TCP11X2Q5H9J9 407 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 TMC6Q7Z403 805 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 PORCNQ9H237 461 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 BHMT2Q9H2M3 363 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 ZSWIM4Q9H7M6 989 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 SLC39A2Q9NP94 309 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 RRAGDQ9NQL2 400 aaPredicted RBP17.04■□□□□ 0.32
COPS3-201ENST00000268717 MAPK8IP1Q9UQF2 711 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 PCDHA2Q9Y5H9 948 aa17.04■□□□□ 0.32
COPS3-201ENST00000268717 KRT18P05783 430 aaKnown RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 MAPK4P31152 587 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 GIT2Q14161 759 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 ZNF746Q6NUN9 644 aaPredicted RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 LRRC8AQ8IWT6 810 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 TPH2Q8IWU9 490 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 MYOCDQ8IZQ8 938 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 ANKRD35Q8N283 1001 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 SLAIN1Q8ND83 568 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 DUSP9Q99956 384 aaKnown RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 LXNQ9BS40 222 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 GJD2Q9UKL4 321 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 WDR64B1ANS9 1081 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 KCNJ18B7U540 433 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 FGFR1OPO95684 399 aaKnown RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 GAP43P17677 238 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 ICAM3P32942 547 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 PMS1P54277 932 aaKnown RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 CCNA1P78396 465 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 CTTNQ14247 550 aaKnown RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 KCNJ12Q14500 433 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 SPECC1LQ69YQ0 1117 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 FILIP1Q7Z7B0 1213 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 CSGALNACT2Q8N6G5 542 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 PXYLP1Q8TE99 480 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 RTN4Q9NQC3 1192 aaKnown RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 DBR1Q9UK59 544 aaKnown RBP17.03■□□□□ 0.32
COPS3-201ENST00000268717 COL4A3BPQ9Y5P4 624 aa17.03■□□□□ 0.32
COPS3-201ENST00000268717 LOC102724159A0A0B4J2E5 919 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 TRIM49BA6NDI0 452 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 B4DLN1 442 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 ADCY3O60266 1144 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 EIF3JO75822 258 aaKnown RBP17.02■□□□□ 0.31
COPS3-201ENST00000268717 EDNRBP24530 442 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 PWP2Q15269 919 aaKnown RBP17.02■□□□□ 0.31
COPS3-201ENST00000268717 KRT31Q15323 416 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 STXBP2Q15833 593 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 HERC4Q5GLZ8 1057 aaPredicted RBP17.02■□□□□ 0.31
COPS3-201ENST00000268717 RINT1Q6NUQ1 792 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 C1orf186Q6ZWK4 172 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 GPR142Q7Z601 462 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 IRF2BP1Q8IU81 584 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 SMAP1Q8IYB5 467 aaPredicted RBP17.02■□□□□ 0.31
COPS3-201ENST00000268717 SHCBP1Q8NEM2 672 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 TSG101Q99816 390 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 REEP2Q9BRK0 252 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 MOV10L1Q9BXT6 1211 aaKnown RBP17.02■□□□□ 0.31
COPS3-201ENST00000268717 OLFML3Q9NRN5 406 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 SEL1LQ9UBV2 794 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 ODF2LQ9ULJ1 636 aa17.02■□□□□ 0.31
COPS3-201ENST00000268717 MKI67P46013 3256 aaKnown RBP17.02■□□□□ 0.31
COPS3-201ENST00000268717 LCTP09848 1927 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 KCNA2P16389 499 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 GUCY2CP25092 1073 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 PBX1P40424 430 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 QARSP47897 775 aaKnown RBP17.01■□□□□ 0.31
COPS3-201ENST00000268717 TBX2Q13207 712 aaPredicted RBP17.01■□□□□ 0.31
COPS3-201ENST00000268717 HSP90AA4PQ58FG1 418 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 ANKRD40Q6AI12 368 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 PPP4R3CPQ6ZMV5 832 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 C4orf19Q8IY42 314 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 KIAA1524Q8TCG1 905 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 CACTINQ8WUQ7 758 aaKnown RBP17.01■□□□□ 0.31
COPS3-201ENST00000268717 ZNF830Q96NB3 372 aaPredicted RBP17.01■□□□□ 0.31
COPS3-201ENST00000268717 SRRTQ9BXP5 876 aaKnown RBP17.01■□□□□ 0.31
COPS3-201ENST00000268717 SEMA6BQ9H3T3 888 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 MROH8Q9H579 483 aa17.01■□□□□ 0.31
COPS3-201ENST00000268717 MAGEC2Q9UBF1 373 aaPredicted RBP17.01■□□□□ 0.31
COPS3-201ENST00000268717 ITIH6Q6UXX5 1313 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms