RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SFR1Q86XK3 245 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 MPHOSPH6Q99547 160 aaKnown RBP18.15■□□□□ 0.5
TPM1-201ENST00000267996 EFCC1Q9HA90 598 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 ANKEF1Q9NU02 776 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 KIF20AO95235 890 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 ATG7O95352 703 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 TGFB3P10600 412 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 YWHABP31946 246 aaKnown RBP18.14■□□□□ 0.49
TPM1-201ENST00000267996 PBX1P40424 430 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 COPB1P53618 953 aaKnown RBP18.14■□□□□ 0.49
TPM1-201ENST00000267996 ACTR2P61160 394 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 ABHD15Q6UXT9 468 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 RASAL3Q86YV0 1011 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 ABRAQ8N0Z2 381 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 ANKRD20A12PQ8NF67 263 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 PARK7Q99497 189 aaKnown RBP18.14■□□□□ 0.49
TPM1-201ENST00000267996 TBC1D7Q9P0N9 293 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 SEL1LQ9UBV2 794 aa18.14■□□□□ 0.49
TPM1-201ENST00000267996 DOCK5Q9H7D0 1870 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 STBD1O95210 358 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 PSAPP07602 524 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 MAPK7Q13164 816 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 BMT2Q1RMZ1 405 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 FILIP1LQ4L180 1135 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 PADI6Q6TGC4 694 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 SEPT14Q6ZU15 432 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 ANKRD13CQ8N6S4 541 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 CACTINQ8WUQ7 758 aaKnown RBP18.13■□□□□ 0.49
TPM1-201ENST00000267996 KCTD10Q9H3F6 313 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 ZHX3Q9H4I2 956 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 PASKQ96RG2 1323 aa18.13■□□□□ 0.49
TPM1-201ENST00000267996 TEX33O43247 280 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 DKC1O60832 514 aaKnown RBP eCLIP18.12■□□□□ 0.49
TPM1-201ENST00000267996 FAM13AO94988 1023 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 CASP5P51878 434 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 TBX2Q13207 712 aaPredicted RBP18.12■□□□□ 0.49
TPM1-201ENST00000267996 FAM114A1Q8IWE2 563 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 LRRC8AQ8IWT6 810 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 DAW1Q8N136 415 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 PARVGQ9HBI0 331 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 ZCCHC17Q9NP64 241 aaKnown RBP18.12■□□□□ 0.49
TPM1-201ENST00000267996 TELO2Q9Y4R8 837 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 ZNF862O60290 1169 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 FGFR1OPO95684 399 aaKnown RBP18.12■□□□□ 0.49
TPM1-201ENST00000267996 SUPT20HL2P0C7V6 817 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 UBA1P22314 1058 aaKnown RBP18.12■□□□□ 0.49
TPM1-201ENST00000267996 ZNF792Q3KQV3 632 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 WDR78Q5VTH9 848 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 MIS18BP1Q6P0N0 1132 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 LRRC55Q6ZSA7 311 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 SAPCD2Q86UD0 394 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 ZC3H3Q8IXZ2 948 aaKnown RBP18.12■□□□□ 0.49
TPM1-201ENST00000267996 ZNF507Q8TCN5 953 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 ATP6V0A1Q93050 837 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 FIZ1Q96SL8 496 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 TSG101Q99816 390 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 TIPINQ9BVW5 301 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 RRAGDQ9NQL2 400 aaPredicted RBP18.12■□□□□ 0.49
TPM1-201ENST00000267996 GABBR1Q9UBS5 961 aa18.12■□□□□ 0.49
TPM1-201ENST00000267996 STRNO43815 780 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 MSNP26038 577 aaKnown RBP18.11■□□□□ 0.49
TPM1-201ENST00000267996 HOXD13P35453 343 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 ZNF157P51786 506 aaPredicted RBP18.11■□□□□ 0.49
TPM1-201ENST00000267996 NEDD9Q14511 834 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 ARID5BQ14865 1188 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 FAM110CQ1W6H9 321 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 SPECC1LQ69YQ0 1117 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 KCNV1Q6PIU1 500 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 CYFIP1Q7L576 1253 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 CCDC150Q8NCX0 1101 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 TAB2Q9NYJ8 693 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 MAGEC2Q9UBF1 373 aaPredicted RBP18.11■□□□□ 0.49
TPM1-201ENST00000267996 SYNGAP1Q96PV0 1343 aa18.11■□□□□ 0.49
TPM1-201ENST00000267996 IGKV6D-21A0A0A0MT36 114 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 MANSC4A6NHS7 340 aaPredicted RBP18.1■□□□□ 0.49
TPM1-201ENST00000267996 SFI1A8K8P3 1242 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 N4BP3O15049 544 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 EIF3DO15371 548 aaKnown RBP eCLIP18.1■□□□□ 0.49
TPM1-201ENST00000267996 HIP1RO75146 1068 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 FARP2O94887 1054 aaPredicted RBP18.1■□□□□ 0.49
TPM1-201ENST00000267996 MYBP10242 640 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 LRMPQ12912 555 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 SWSAP1Q6NVH7 229 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 ARMCX5Q6P1M9 558 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 PPP4R3CPQ6ZMV5 832 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 ANO5Q75V66 913 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 CCDC60Q8IWA6 550 aaPredicted RBP18.1■□□□□ 0.49
TPM1-201ENST00000267996 MYCT1Q8N699 235 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 CNOT6LQ96LI5 555 aaKnown RBP18.1■□□□□ 0.49
TPM1-201ENST00000267996 MRPL44Q9H9J2 332 aaKnown RBP18.1■□□□□ 0.49
TPM1-201ENST00000267996 POLD4Q9HCU8 107 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 ADGRA2Q96PE1 1338 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 IGSF9BQ9UPX0 1349 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 PLXNB2O15031 1838 aa18.1■□□□□ 0.49
TPM1-201ENST00000267996 ASB14A6NK59 587 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 LGALS16A8MUM7 142 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 BACH1O14867 736 aa18.09■□□□□ 0.49
TPM1-201ENST00000267996 ZNF500O60304 480 aaPredicted RBP18.09■□□□□ 0.49
TPM1-201ENST00000267996 FKBP3Q00688 224 aaKnown RBP18.09■□□□□ 0.49
TPM1-201ENST00000267996 KNOP1Q1ED39 458 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 279.2 ms