RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 PRAMEP78395 509 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 TRIM16LQ309B1 348 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 FAF2Q96CS3 445 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 MRPL40Q9NQ50 206 aaKnown RBP11.95□□□□□ -0.5
CHFR-201ENST00000266880 DENND2AQ9ULE3 1009 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 GMNCA6NCL1 334 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 NBPF26B4DH59 902 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 ZBED1O96006 694 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 PPP2R2AP63151 447 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 NBPF15Q8N660 670 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 LINS1Q8NG48 757 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 HPS4Q9NQG7 708 aa11.95□□□□□ -0.5
CHFR-201ENST00000266880 TOM1O60784 492 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 TIMM10P62072 90 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 GUCY1A3Q02108 690 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 ZNF555Q8NEP9 628 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 TUBGCP3Q96CW5 907 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 IL17RAQ96F46 866 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 SASH1O94885 1247 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 IL10P22301 178 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 ARHGEF16Q5VV41 709 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 AGBL1Q96MI9 1066 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 CUL7Q14999 1698 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 ANKRD12Q6UB98 2062 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 LRRIQ4A6NIV6 560 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 GRIN1Q05586 938 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 DPCR1Q3MIW9 517 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 RFWD2Q8NHY2 731 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 BTN2A2Q8WVV5 523 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 CYLC2Q14093 348 aaPredicted RBP11.94□□□□□ -0.5
CHFR-201ENST00000266880 EMBQ6PCB8 327 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 TTC25Q96NG3 672 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 MICAL3Q7RTP6 2002 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 UBTFL6P0CB48 400 aaPredicted RBP11.94□□□□□ -0.5
CHFR-201ENST00000266880 IMPG1Q17R60 797 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 PATL1Q86TB9 770 aaKnown RBP11.94□□□□□ -0.5
CHFR-201ENST00000266880 TGFBRAP1Q8WUH2 860 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 NT5C1BQ96P26 610 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 IMPDH2P12268 514 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 BLIDQ8IZY5 108 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 APPBP2Q92624 585 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 CCT7Q99832 543 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 SIKE1Q9BRV8 207 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 KLHL31Q9H511 634 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 SUGCTQ9HAC7 445 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 TCP11X1B4DZS4 312 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 SMAPO00193 183 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 IPO5O00410 1097 aaKnown RBP11.94□□□□□ -0.5
CHFR-201ENST00000266880 PRPSAP2O60256 369 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 SNX2O60749 519 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 DEFA1P59665 94 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 DEFA3P59666 94 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 NLRX1Q86UT6 975 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 HORMAD1Q86X24 394 aa11.94□□□□□ -0.5
CHFR-201ENST00000266880 TRIM66O15016 1216 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 PAX3P23760 479 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ANO4Q32M45 955 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ZNF507Q8TCN5 953 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ZC3H12CQ9C0D7 883 aaKnown RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 ARPP21Q9UBL0 812 aaPredicted RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 PGM1P36871 562 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 CC2D2BQ6DHV5 1058 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 TMEM165Q9HC07 324 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 DKK3Q9UBP4 350 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 EXOC8Q8IYI6 725 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ZNF654Q8IZM8 581 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 LINC00854A0A1B0GVQ3 168 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ENO1P06733 434 aaKnown RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 BPIFB4P59827 614 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 LBRQ14739 615 aaKnown RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 CATSPER1Q8NEC5 780 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 FAM149B1Q96BN6 582 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 CHMP2BQ9UQN3 213 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 KCNA2P16389 499 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 PLOD1Q02809 727 aaPredicted RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 MAPKAPK5Q8IW41 473 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 NUP93Q8N1F7 819 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 PRG3Q9Y2Y8 225 aaPredicted RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 CDK13Q14004 1512 aaKnown RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 TMEM191CA6NGB0 347 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 CYP27A1Q02318 531 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 PTK2Q05397 1052 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 TCP10Q12799 353 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 NFRKBQ6P4R8 1299 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ZCWPW1Q9H0M4 648 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ZMYM4Q5VZL5 1548 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 TBC1D4O60343 1298 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 ITGB3BPQ13352 177 aaPredicted RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 CARD9Q9H257 536 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 PCF11O94913 1555 aaKnown RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 ST13P50502 369 aaKnown RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 CC2D1AQ6P1N0 951 aaPredicted RBP11.93□□□□□ -0.5
CHFR-201ENST00000266880 SLFN12Q8IYM2 578 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 TRIM63Q969Q1 353 aa11.93□□□□□ -0.5
CHFR-201ENST00000266880 TYW5A2RUC4 315 aaKnown RBP11.92□□□□□ -0.5
CHFR-201ENST00000266880 DBNDD2Q9BQY9 259 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 MTA3Q9BTC8 594 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 USE1Q9NZ43 259 aa11.92□□□□□ -0.5
CHFR-201ENST00000266880 COL4A3BPQ9Y5P4 624 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms