RNA–Protein interactions for RNA: ENST00000265073.8

SUB1-201, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUB1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-201ENST00000265073 ORC2Q13416 577 aaPredicted RBP9.7□□□□□ -0.86
SUB1-201ENST00000265073 TSR1Q2NL82 804 aaKnown RBP9.7□□□□□ -0.86
SUB1-201ENST00000265073 CACNA2D4Q7Z3S7 1137 aa9.7□□□□□ -0.86
SUB1-201ENST00000265073 APOBEC3FQ8IUX4 373 aaKnown RBP9.7□□□□□ -0.86
SUB1-201ENST00000265073 OR8K1Q8NGG5 319 aa9.7□□□□□ -0.86
SUB1-201ENST00000265073 PRIMPOLQ96LW4 560 aa9.7□□□□□ -0.86
SUB1-201ENST00000265073 PXMP2Q9NR77 195 aa9.7□□□□□ -0.86
SUB1-201ENST00000265073 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.7□□□□□ -0.86
SUB1-201ENST00000265073 COL4A3BPQ9Y5P4 624 aa9.7□□□□□ -0.86
SUB1-201ENST00000265073 LRRC53A6NM62 1247 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 DHX15O43143 795 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 CYP3A4P08684 503 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 MRPS25P82663 173 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 TDRD12Q587J7 1177 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 FAM102BQ5T8I3 360 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 PADI6Q6TGC4 694 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 CYFIP1Q7L576 1253 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 FAM178BQ8IXR5 827 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 SYCP3Q8IZU3 236 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 LSM14BQ9BX40 385 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 LACRTQ9GZZ8 138 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 BTBD7Q9P203 1132 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 REXO2Q9Y3B8 237 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 DOCK5Q9H7D0 1870 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 BACH1O14867 736 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 SRGAP2O75044 1071 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 RGS20O76081 388 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 EYA4O95677 639 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 SP2Q02086 613 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 KCNMA1Q12791 1236 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 XKR9Q5GH70 373 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 SWSAP1Q6NVH7 229 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 KCTD10Q9H3F6 313 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 AGO4Q9HCK5 861 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 CSADQ9Y600 493 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 SSC5DA1L4H1 1573 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 CCDC169A6NNP5 214 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 SLC16A4O15374 487 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 ZSCAN12O43309 604 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 CYP2C8P10632 490 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 NCBP1Q09161 790 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 HYIQ5T013 277 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 C1orf186Q6ZWK4 172 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 SLC35F6Q8N357 371 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.69□□□□□ -0.86
SUB1-201ENST00000265073 PANX2Q96RD6 677 aa9.69□□□□□ -0.86
SUB1-201ENST00000265073 NAP1L4Q99733 375 aaKnown RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 EPN1Q9Y6I3 576 aaPredicted RBP9.69□□□□□ -0.86
SUB1-201ENST00000265073 BRCA1P38398 1863 aaKnown RBP9.68□□□□□ -0.86
SUB1-201ENST00000265073 ATAD5Q96QE3 1844 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 K7ENM7 598 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 TBX3O15119 743 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 PPP1R12BO60237 982 aaPredicted RBP9.68□□□□□ -0.86
SUB1-201ENST00000265073 CASQ1P31415 396 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 DSG3P32926 999 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 PEX3P56589 373 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 KCNH2Q12809 1159 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 RAPGEF1Q13905 1077 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 KNOP1Q1ED39 458 aaKnown RBP9.68□□□□□ -0.86
SUB1-201ENST00000265073 SUPT20HL1Q3ZLR7 823 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 DAW1Q8N136 415 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 PLEKHA4Q9H4M7 779 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 AS3MTQ9HBK9 375 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 GABBR1Q9UBS5 961 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 AFG3L2Q9Y4W6 797 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 NDUFA10O95299 355 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 MARK3P27448 753 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 USP14P54578 494 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 GFPT1Q06210 699 aaPredicted RBP9.68□□□□□ -0.86
SUB1-201ENST00000265073 Q3C1V9 767 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 ZCWPW2Q504Y3 356 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 MOXD1Q6UVY6 613 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 KIAA1328Q86T90 577 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 MCF2L2Q86YR7 1114 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 CAPZA3Q96KX2 299 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.68□□□□□ -0.86
SUB1-201ENST00000265073 DEF6Q9H4E7 631 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 NHEJ1Q9H9Q4 299 aaPredicted RBP9.68□□□□□ -0.86
SUB1-201ENST00000265073 TXNRD2Q9NNW7 524 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 ASTN1O14525 1302 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 CETN3O15182 167 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 CLSTN1O94985 981 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 NR3C1P04150 777 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 MAN2A1Q16706 1144 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 GJC2Q5T442 439 aaPredicted RBP9.68□□□□□ -0.86
SUB1-201ENST00000265073 CYP26C1Q6V0L0 522 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 CATSPERGQ6ZRH7 1159 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 FAM133AQ8N9E0 248 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 EHMT1Q9H9B1 1298 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 PARVGQ9HBI0 331 aa9.68□□□□□ -0.86
SUB1-201ENST00000265073 MYH10P35580 1976 aa9.67□□□□□ -0.86
SUB1-201ENST00000265073 COL2A1P02458 1487 aaPredicted RBP9.67□□□□□ -0.86
SUB1-201ENST00000265073 ZNF263O14978 683 aa9.67□□□□□ -0.86
SUB1-201ENST00000265073 TGFB1I1O43294 461 aa9.67□□□□□ -0.86
SUB1-201ENST00000265073 YWHABP31946 246 aaKnown RBP9.67□□□□□ -0.86
SUB1-201ENST00000265073 MAP3K9P80192 1104 aa9.67□□□□□ -0.86
SUB1-201ENST00000265073 PPP2R5CQ13362 524 aa9.67□□□□□ -0.86
SUB1-201ENST00000265073 FAM114A1Q8IWE2 563 aa9.67□□□□□ -0.86
SUB1-201ENST00000265073 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms