RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 KIF17Q9P2E2 1029 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 PRKAB2O43741 272 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 FTCDO95954 541 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 RBL2Q08999 1139 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 KCNA1Q09470 495 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 CNOT6LQ96LI5 555 aaKnown RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 LBHD1Q9BQE6 289 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 CNOT7Q9UIV1 285 aaKnown RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 EIF3CLB5ME19 914 aaKnown RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 INO80B-WBP1J3KQ70 363 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 ZNF500O60304 480 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 HNRNPCP07910 306 aaKnown RBP eCLIP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 OCM2P0CE71 109 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 OCMP0CE72 109 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 DPEP1P16444 411 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 COPB1P53618 953 aaKnown RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 NSUN2Q08J23 767 aaKnown RBP eCLIP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 DMP1Q13316 513 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 EAF2Q96CJ1 260 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 EIF3CQ99613 913 aaKnown RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 ELAC2Q9BQ52 826 aaKnown RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 INO80BQ9C086 356 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 USP44Q9H0E7 712 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 NRBP2Q9NSY0 501 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 ZNF229Q9UJW7 825 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 SUGT1Q9Y2Z0 365 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 A0A0G2JND7 137 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 E7EWF7 191 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 TNPO2O14787 897 aaKnown RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 DDIT3P35638 169 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 TAF1CQ15572 869 aaPredicted RBP13.82□□□□□ -0.2
TTC39A-202ENST00000262676 CATSPER3Q86XQ3 398 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 MIS12Q9H081 205 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 TNKSO95271 1327 aa13.82□□□□□ -0.2
TTC39A-202ENST00000262676 EXOC1LA0A1B0GW35 172 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 GOLGA8SH3BPF8 625 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 LMNAP02545 664 aaKnown RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 STAT2P52630 851 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 KRT33BQ14525 404 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 KCTD6Q8NC69 237 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 USP28Q96RU2 1077 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 MRPL28Q13084 256 aaKnown RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 ME3Q16798 604 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 DDX25Q9UHL0 483 aaKnown RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 MFAP3P55082 362 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 PTK2Q05397 1052 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 GJA10Q969M2 543 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 TEKT3Q9BXF9 490 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 PCDHA12Q9UN75 941 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 TNS3Q68CZ2 1445 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 TLR3O15455 904 aaKnown RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 SLMAPQ14BN4 828 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 SYT2Q8N9I0 419 aaPredicted RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 CNOT10Q9H9A5 744 aaKnown RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 GINM1Q9NU53 330 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 SLC8A2Q9UPR5 921 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 SATB2Q9UPW6 733 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 TTLL1O95922 423 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 PYGBP11216 843 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 EIF2AK2P19525 551 aaKnown RBP13.81□□□□□ -0.2
TTC39A-202ENST00000262676 NR1D1P20393 614 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 BBS5Q8N3I7 341 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 KCNG1Q9UIX4 513 aa13.81□□□□□ -0.2
TTC39A-202ENST00000262676 CARMIL3Q8ND23 1372 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 PI4K2BG5E9Z4 385 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 BMP3P12645 472 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 OSTNP61366 133 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 MECOMQ03112 1051 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 SPP2Q13103 211 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 NAF1Q96HR8 494 aaKnown RBP13.8□□□□□ -0.2
TTC39A-202ENST00000262676 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 L3MBTL1Q9Y468 752 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 HSPA4LO95757 839 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 NDUFA8P51970 172 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 KPNA2P52292 529 aaKnown RBP13.8□□□□□ -0.2
TTC39A-202ENST00000262676 GYS2P54840 703 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 GPSM2P81274 684 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 TAGAPQ8N103 731 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 SNX19Q92543 992 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 FGFR1OP2Q9NVK5 253 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 CDV3Q9UKY7 258 aaKnown RBP13.8□□□□□ -0.2
TTC39A-202ENST00000262676 GYG2O15488 501 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 SUPT3HO75486 399 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 GSPT1P15170 499 aaKnown RBP13.8□□□□□ -0.2
TTC39A-202ENST00000262676 HADHAP40939 763 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 BLIDQ8IZY5 108 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 AP1M1Q9BXS5 423 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 TLR7Q9NYK1 1049 aaKnown RBP13.8□□□□□ -0.2
TTC39A-202ENST00000262676 STX18Q9P2W9 335 aaKnown RBP13.8□□□□□ -0.2
TTC39A-202ENST00000262676 ABCA8O94911 1581 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 ERVV-1B6SEH8 477 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 ESRRBO95718 433 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 CHEK2O96017 543 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 SPATA1Q5VX52 437 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 GIMAP4Q9NUV9 329 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 CFAP43Q8NDM7 1665 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 FAM135BQ49AJ0 1406 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 DEUP1Q05D60 604 aa13.8□□□□□ -0.2
TTC39A-202ENST00000262676 FAM95CA0A1B0GW59 222 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms