RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 RBM46Q8TBY0 533 aaKnown RBP14.21□□□□□ -0.13
SNX1-201ENST00000261889 RAD54LQ92698 747 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 PYM1Q9BRP8 204 aaKnown RBP14.21□□□□□ -0.13
SNX1-201ENST00000261889 GDF3Q9NR23 364 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 ATP8A2Q9NTI2 1148 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 PTPN22Q9Y2R2 807 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 ATP6V0A2Q9Y487 856 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 ARHGAP44Q17R89 818 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 ZNF746Q6NUN9 644 aaPredicted RBP14.21□□□□□ -0.13
SNX1-201ENST00000261889 FBXO33Q7Z6M2 555 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 PALB2Q86YC2 1186 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 N4BP2L2Q92802 583 aaPredicted RBP14.21□□□□□ -0.13
SNX1-201ENST00000261889 ARHGEF1Q92888 912 aaKnown RBP14.21□□□□□ -0.13
SNX1-201ENST00000261889 FAM84AQ96KN4 292 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 TSG101Q99816 390 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 KLC4Q9NSK0 619 aa14.21□□□□□ -0.13
SNX1-201ENST00000261889 PALM3A6NDB9 673 aaPredicted RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 CHMP2AO43633 222 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 FGGP02679 453 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 ECHS1P30084 290 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 USH1GQ495M9 461 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 ALS2CLQ60I27 953 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 DPP8Q6V1X1 898 aaPredicted RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 CCDC84Q86UT8 332 aaPredicted RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 RAPGEF5Q92565 580 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 ZMYND12Q9H0C1 365 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 LEMD3Q9Y2U8 911 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 SNX24Q9Y343 169 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 LTBP1Q14766 1721 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 PPP1R11O60927 126 aaPredicted RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 MYBP10242 640 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 PLTPP55058 493 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 ACCSLQ4AC99 568 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 GLYCTKQ8IVS8 523 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 ANKS1AQ92625 1134 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 TACO1Q9BSH4 297 aaKnown RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 L3MBTL1Q9Y468 752 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 USP17L10C9JJH3 530 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 ATMINO43313 823 aaPredicted RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 CAND2O75155 1236 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 CLTAP09496 248 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 KRT13P13646 458 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 RDXP35241 583 aaKnown RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 NAB2Q15742 525 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 KRT25Q7Z3Z0 450 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 PEX26Q7Z412 305 aa14.2□□□□□ -0.14
SNX1-201ENST00000261889 PRPF38AQ8NAV1 312 aaKnown RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 DDX25Q9UHL0 483 aaKnown RBP14.2□□□□□ -0.14
SNX1-201ENST00000261889 CALCAP01258 141 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 FGRP09769 529 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 SCNN1DP51172 638 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
SNX1-201ENST00000261889 SLC18A3Q16572 532 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 MEI1Q5TIA1 1274 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 ALKBH5Q6P6C2 394 aaKnown RBP14.19□□□□□ -0.14
SNX1-201ENST00000261889 KDM7AQ6ZMT4 941 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 SEPT14Q6ZU15 432 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 CYP2W1Q8TAV3 490 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 SCFD1Q8WVM8 642 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 ERVK-5Q9HDB9 667 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 TAS2R14Q9NYV8 317 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 IGSF9BQ9UPX0 1349 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 SPDYE3A6NKU9 549 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 CPP00450 1065 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 SERPING1P05155 500 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 AKR1B1P15121 316 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 IFI35P80217 286 aaPredicted RBP14.19□□□□□ -0.14
SNX1-201ENST00000261889 COG2Q14746 738 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 TNIP1Q15025 636 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 CCDC91Q7Z6B0 441 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 DGKHQ86XP1 1220 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 CNPY4Q8N129 248 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 KIF2BQ8N4N8 673 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 PIGOQ8TEQ8 1089 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 UPF1Q92900 1129 aaKnown RBP eCLIP14.19□□□□□ -0.14
SNX1-201ENST00000261889 CAVIN3Q969G5 261 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 FAM118BQ9BPY3 351 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 TAF1DQ9H5J8 278 aaPredicted RBP14.19□□□□□ -0.14
SNX1-201ENST00000261889 CTNND1O60716 968 aaKnown RBP14.19□□□□□ -0.14
SNX1-201ENST00000261889 FGFR4P22455 802 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 USP8P40818 1118 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 MARCKSL1P49006 195 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 CDR1P51861 262 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 FKBP3Q00688 224 aaKnown RBP14.19□□□□□ -0.14
SNX1-201ENST00000261889 SETQ01105 290 aaPredicted RBP14.19□□□□□ -0.14
SNX1-201ENST00000261889 TMEM266Q2M3C6 531 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 B4GALNT4Q76KP1 1039 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 HAS1Q92839 578 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 PCDHA12Q9UN75 941 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 CACNA1SQ13698 1873 aa14.19□□□□□ -0.14
SNX1-201ENST00000261889 BRCA1P38398 1863 aaKnown RBP14.18□□□□□ -0.14
SNX1-201ENST00000261889 A0A1W2PQJ5 194 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 KIF4AO95239 1232 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 TRIM49P0CI25 452 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 TRIM49CP0CI26 452 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 SKOR1P84550 965 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 PPP1R7Q15435 360 aa14.18□□□□□ -0.14
SNX1-201ENST00000261889 ZKSCAN8Q15776 578 aaPredicted RBP14.18□□□□□ -0.14
SNX1-201ENST00000261889 HIBCHQ6NVY1 386 aaPredicted RBP14.18□□□□□ -0.14
SNX1-201ENST00000261889 TBC1D1Q86TI0 1168 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms