RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 SLC17A8Q8NDX2 589 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 RIOK1Q9BRS2 568 aaKnown RBP10.98□□□□□ -0.65
PALB2-201ENST00000261584 KLHL11Q9NVR0 708 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 AGLP35573 1532 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 SETD1AO15047 1707 aaKnown RBP10.98□□□□□ -0.65
PALB2-201ENST00000261584 CHUKO15111 745 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 THAP12O43422 761 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 TOM1O60784 492 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 PIAS1O75925 651 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 GCLMP48507 274 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 PPP2R2AP63151 447 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 KLHDC7AQ5VTJ3 777 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 FAM178BQ8IXR5 827 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 FAM186BQ8IYM0 893 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 ZMYND12Q9H0C1 365 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 TSKSQ9UJT2 592 aa10.98□□□□□ -0.65
PALB2-201ENST00000261584 TPX2Q9ULW0 747 aaKnown RBP10.98□□□□□ -0.65
PALB2-201ENST00000261584 SPAG7O75391 227 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 MYBP10242 640 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 MYCLP12524 364 aaPredicted RBP10.97□□□□□ -0.65
PALB2-201ENST00000261584 CHN1P15882 459 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 FLT3P36888 993 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 ZNF365Q70YC5 407 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 PARP9Q8IXQ6 854 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 METTL13Q8N6R0 699 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 WDR66Q8TBY9 1149 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 SEC16BQ96JE7 1060 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 TCHPQ9BT92 498 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 FGFBP2Q9BYJ0 223 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 CCNL1Q9UK58 526 aaPredicted RBP10.97□□□□□ -0.65
PALB2-201ENST00000261584 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
PALB2-201ENST00000261584 CCDC160A6NGH7 325 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 STXBP3O00186 592 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 AKR1B1P15121 316 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 FAM84AQ96KN4 292 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 BRIP1Q9BX63 1249 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 PRM3Q9NNZ6 103 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 ACP6Q9NPH0 428 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 PLCB1Q9NQ66 1216 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 KCND1Q9NSA2 647 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 MTUS1Q9ULD2 1270 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 EVI5O60447 810 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 ERVK-9P63128 1117 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 TMED2Q15363 201 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 SLC30A5Q8TAD4 765 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 RAD54LQ92698 747 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 PSMD1Q99460 953 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 ANKRD2Q9GZV1 360 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 BCAS3Q9H6U6 928 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 VIPAS39Q9H9C1 493 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 IL17RBQ9NRM6 502 aa10.97□□□□□ -0.65
PALB2-201ENST00000261584 ARHGEF35A5YM69 484 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 HMGB1P1B2RPK0 211 aaPredicted RBP10.96□□□□□ -0.65
PALB2-201ENST00000261584 CALUO43852 315 aaPredicted RBP10.96□□□□□ -0.65
PALB2-201ENST00000261584 DIAPH2O60879 1101 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 CAND2O75155 1236 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 CALCAP01258 141 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 DYNLT1P63172 113 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 KCNA1Q09470 495 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 SH3RF1Q7Z6J0 888 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 PASD1Q8IV76 773 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 DNAJC12Q9UKB3 198 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 RASGRF2O14827 1237 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 LGR5O75473 907 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 NEK9Q8TD19 979 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 DBNDD1Q9H9R9 158 aa10.96□□□□□ -0.65
PALB2-201ENST00000261584 ZBTB39O15060 712 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 PBX1P40424 430 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 GALCP54803 685 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 ATP11AP98196 1134 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 TRIM28Q13263 835 aaKnown RBP10.96□□□□□ -0.66
PALB2-201ENST00000261584 GRB10Q13322 594 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 ITPK1Q13572 414 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 SLC29A2Q14542 456 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 GNPTABQ3T906 1256 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 LMBRD2Q68DH5 695 aaPredicted RBP10.96□□□□□ -0.66
PALB2-201ENST00000261584 UBL4BQ8N7F7 174 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 WHAMMQ8TF30 809 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 RAPGEF5Q92565 580 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 SPDL1Q96EA4 605 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 RAB17Q9H0T7 212 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.96□□□□□ -0.66
PALB2-201ENST00000261584 SWAP70Q9UH65 585 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 DCTN4Q9UJW0 460 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 GGA1Q9UJY5 639 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 PNPLA7Q6ZV29 1317 aa10.96□□□□□ -0.66
PALB2-201ENST00000261584 DRAP1Q14919 205 aaPredicted RBP10.95□□□□□ -0.66
PALB2-201ENST00000261584 SETDB1Q15047 1291 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
PALB2-201ENST00000261584 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 DDX23Q9BUQ8 820 aaKnown RBP10.95□□□□□ -0.66
PALB2-201ENST00000261584 FGFR1OP2Q9NVK5 253 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 FAM53CQ9NYF3 392 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 SPATA31A3Q5VYP0 1347 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 TCP11X1B4DZS4 312 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 K7ENM7 598 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 PAX7P23759 505 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 PSMC6P62333 389 aa10.95□□□□□ -0.66
PALB2-201ENST00000261584 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms