RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 LRWD1Q9UFC0 647 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 L1RE1Q9UN81 338 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 ARP10275 920 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 BCRP11274 1271 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 FCER1AP12319 257 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 UBA7P41226 1012 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 NEDD9Q14511 834 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 MAP9Q49MG5 647 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 WDR11Q9BZH6 1224 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 XPO4Q9C0E2 1151 aaKnown RBP20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 CCSER1Q9C0I3 900 aa20.89■□□□□ 0.93
COL4A3BP-201ENST00000261415 TM4SF4P48230 202 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 ALDH5A1P51649 535 aaPredicted RBP20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 LONRF3Q496Y0 759 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 KAT2BQ92831 832 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 MIEF2Q96C03 454 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 JADE2Q9NQC1 790 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 RASSF10A6NK89 507 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 IWS1Q96ST2 819 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 KCNH7Q9NS40 1196 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 ADD3Q9UEY8 706 aaKnown RBP20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 CPA4Q9UI42 421 aa20.88■□□□□ 0.93
COL4A3BP-201ENST00000261415 DNAJC25-GNG10A0A024R161 153 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 SOWAHBA6NEL2 793 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 FANCGO15287 622 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 PGK2P07205 417 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 SPIRE1Q08AE8 756 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 MTMR1Q13613 665 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 KARSQ15046 597 aaKnown RBP20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 DEFB115Q30KQ5 88 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 CABP7Q86V35 215 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 SLC5A5Q92911 643 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 DHX58Q96C10 678 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 SDF4Q9BRK5 362 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 ZNF577Q9BSK1 485 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 MMTAG2Q9BU76 263 aaKnown RBP20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 IFNKQ9P0W0 207 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 VAV3Q9UKW4 847 aa20.87■□□□□ 0.93
COL4A3BP-201ENST00000261415 LOXHD1Q8IVV2 1947 aa20.86■□□□□ 0.93
COL4A3BP-201ENST00000261415 ACTN4O43707 911 aaKnown RBP20.86■□□□□ 0.93
COL4A3BP-201ENST00000261415 NOGQ13253 232 aa20.86■□□□□ 0.93
COL4A3BP-201ENST00000261415 CAPNS2Q96L46 248 aa20.86■□□□□ 0.93
COL4A3BP-201ENST00000261415 DISC1Q9NRI5 854 aa20.86■□□□□ 0.93
COL4A3BP-201ENST00000261415 SERTAD1Q9UHV2 236 aa20.86■□□□□ 0.93
COL4A3BP-201ENST00000261415 IPO5O00410 1097 aaKnown RBP20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 TLR2O60603 784 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 KCNV1Q6PIU1 500 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 RASSF8Q8NHQ8 419 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 ERCC4Q92889 916 aaPredicted RBP20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 FGD4Q96M96 766 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 PYM1Q9BRP8 204 aaKnown RBP20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 PSMD10O75832 226 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 STAM2O75886 525 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 GNG11P61952 73 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 FMNL3Q8IVF7 1028 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 MSANTD4Q8NCY6 345 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 INPP4AQ96PE3 977 aaPredicted RBP20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 FAM204AQ9H8W3 233 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 ZFYVE28Q9HCC9 887 aa20.85■□□□□ 0.93
COL4A3BP-201ENST00000261415 TMCO5BA8MYB1 307 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 EBAG9O00559 213 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 LIG3P49916 1009 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 IRX1P78414 480 aaPredicted RBP20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 CRHR2Q13324 411 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 KRT79Q5XKE5 535 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 AFAP1L1Q8TED9 768 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 GPRASP2Q96D09 838 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 AGO4Q9HCK5 861 aaKnown RBP20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 IVNS1ABPQ9Y6Y0 642 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 ARHGAP6O43182 974 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 STRNO43815 780 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 GAS7O60861 476 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 AOC2O75106 756 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 N4BP1O75113 896 aaKnown RBP20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 RGS20O76081 388 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 EDNRBP24530 442 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 ELF1P32519 619 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 CHMP4BP1P59074 171 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 STXBP2Q15833 593 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 C17orf99Q6UX52 265 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 GPR142Q7Z601 462 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 SRGAP1Q7Z6B7 1085 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 ABRAQ8N0Z2 381 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 SNX29Q8TEQ0 813 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 CABS1Q96KC9 395 aa20.84■□□□□ 0.93
COL4A3BP-201ENST00000261415 ZSWIM8A7E2V4 1837 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 MAPK4P31152 587 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 TUBB2AQ13885 445 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 NCAPH2Q6IBW4 605 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 OTOP1Q7RTM1 612 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 NLRX1Q86UT6 975 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 CEP112Q8N8E3 955 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 RIT2Q99578 217 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 NUDT12Q9BQG2 462 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 TUBB2BQ9BVA1 445 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 PKD2L1Q9P0L9 805 aa20.83■□□□□ 0.93
COL4A3BP-201ENST00000261415 MYH9P35579 1960 aaKnown RBP20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 ADORA2AP29274 412 aa20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 RDXP35241 583 aaKnown RBP20.83■□□□□ 0.92
COL4A3BP-201ENST00000261415 STAT6P42226 847 aa20.83■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms