RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 PPP1R9AQ9ULJ8 1098 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 NOVA2Q9UNW9 492 aaKnown RBP13.04□□□□□ -0.32
COL8A1-201ENST00000261037 NNTQ13423 1086 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 THNSL1Q8IYQ7 743 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 MB21D1Q8N884 522 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 FGD4Q96M96 766 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 BHMT2Q9H2M3 363 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 PRKAG2Q9UGJ0 569 aa13.04□□□□□ -0.32
COL8A1-201ENST00000261037 PHLPP2Q6ZVD8 1323 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 CFLARO15519 480 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 GH2P01242 217 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 PSMA2P25787 234 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 E2F5Q15329 346 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 MAML1Q92585 1016 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
COL8A1-201ENST00000261037 TRIM49BA6NDI0 452 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 SLMAPQ14BN4 828 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL8A1-201ENST00000261037 SLC27A3Q5K4L6 730 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 PCGF5Q86SE9 256 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 SPATS2Q86XZ4 545 aaKnown RBP13.03□□□□□ -0.32
COL8A1-201ENST00000261037 WHAMMQ8TF30 809 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 RNF139Q8WU17 664 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 GDAQ9Y2T3 454 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 EXOC1LA0A1B0GW35 172 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 CCNE1P24864 410 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 PEX19P40855 299 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
COL8A1-201ENST00000261037 TCP11Q8WWU5 503 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 PBKQ96KB5 322 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 NDST4Q9H3R1 872 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 HACD3Q9P035 362 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 TRPA1O75762 1119 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 NDUFA10O95299 355 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 ATP1A3P13637 1013 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 NSUN2Q08J23 767 aaKnown RBP eCLIP13.03□□□□□ -0.32
COL8A1-201ENST00000261037 KRT31Q15323 416 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 ZBTB41Q5SVQ8 909 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 CIAPIN1Q6FI81 312 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 OSBPL3Q9H4L5 887 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 POLIQ9UNA4 740 aa13.03□□□□□ -0.32
COL8A1-201ENST00000261037 POTEMA6NI47 508 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 ACSL3O95573 720 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 TBC1D10CQ8IV04 446 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 ZNF668Q96K58 619 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-201ENST00000261037 TSPYL2Q9H2G4 693 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-201ENST00000261037 JRKLQ9Y4A0 524 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 PRR36Q9H6K5 1346 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 ZNF233A6NK53 670 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 HDLBPQ00341 1268 aaKnown RBP13.02□□□□□ -0.32
COL8A1-201ENST00000261037 YWHAHQ04917 246 aaPredicted RBP13.02□□□□□ -0.32
COL8A1-201ENST00000261037 GANCQ8TET4 914 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 TMEM260Q9NX78 707 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 PCDHA6Q9UN73 950 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 PCDHA8Q9Y5H6 950 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 CLTCL1P53675 1640 aa13.02□□□□□ -0.32
COL8A1-201ENST00000261037 CTNND1O60716 968 aaKnown RBP13.02□□□□□ -0.33
COL8A1-201ENST00000261037 ZBED1O96006 694 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 TOGARAM2Q6ZUX3 1019 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 FAF2Q96CS3 445 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 UNC13BO14795 1591 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 IFNAR1P17181 557 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 ANKRD20A4Q4UJ75 823 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 ANKRD20A8PQ5CZ79 823 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 ANKRD20A2Q5SQ80 823 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 ANKRD20A1Q5TYW2 823 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 CYB5R4Q7L1T6 521 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 ERICH1Q86X53 443 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 EXOC8Q8IYI6 725 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 CDHR1Q96JP9 859 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 PARD6BQ9BYG5 372 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 SLC8A1P32418 973 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 ZNF449Q6P9G9 518 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 NUDCD1Q96RS6 583 aa13.02□□□□□ -0.33
COL8A1-201ENST00000261037 XAB2Q9HCS7 855 aaKnown RBP13.02□□□□□ -0.33
COL8A1-201ENST00000261037 BSDC1Q9NW68 430 aaPredicted RBP13.02□□□□□ -0.33
COL8A1-201ENST00000261037 SNAP23O00161 211 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 EVI5O60447 810 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 NPR1P16066 1061 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 SSTR3P32745 418 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-201ENST00000261037 CDR2Q01850 454 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 PSMD2Q13200 908 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 TRIM67Q6ZTA4 783 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 PALLDQ8WX93 1383 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 CRKP46108 304 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 ZBED6P86452 979 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 ARID5BQ14865 1188 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 SMAD1Q15797 465 aaKnown RBP13.01□□□□□ -0.33
COL8A1-201ENST00000261037 PPP6R3Q5H9R7 873 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-201ENST00000261037 PDCD7Q8N8D1 485 aaKnown RBP13.01□□□□□ -0.33
COL8A1-201ENST00000261037 RCOR1Q9UKL0 485 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 FAF1Q9UNN5 650 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-201ENST00000261037 GOLGA8MH3BSY2 632 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 SRGAP2O75044 1071 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 STMN1P16949 149 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 RSBN1LQ6PCB5 846 aaPredicted RBP13.01□□□□□ -0.33
COL8A1-201ENST00000261037 FAM160B2Q86V87 743 aa13.01□□□□□ -0.33
COL8A1-201ENST00000261037 SLC10A4Q96EP9 437 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms